K16036

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K16036

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16036

Determination of introduced cDNA(s)

  • J023068H23 - Rice Full-length cDNAs - Original: J023068H23

    full reading [+] show sequence

    Nucleotide sequence: J023068H23 - full reading 
    GCCTTCCACA CCGCACCACT CCACGCCTTC CTCCTCTTCT CTCGCAGTCC 
    ACTCGCTGGT CTCTCCAATT CTTGGCTTCT TTGCTCTGCT GGATTAGCAG 
    CAGCTGCTCT GCTTCTTGCT CTGCCCTTGT CTTTGGGCTT TCAGGGCGGT 
    GTGCTGAGGC CGAGCGGTTT GGGCGGTCTC AAGAATCGCT TGTGCGTGCG 
    GGGGAGTTGT CGTGGGAGGT GGGGATGGAG AGGTACGAGG TGATCAAGGA 
    CATAGGGTCG GGGAACTTCG GCGTGGCCAA GCTTGTCCGG GATGTGCGGA 
    CCAAGGAGCT GTTTGCCGTC AAGTTCATCG AGAGGGGGCA GAAGATCGAC 
    GAGAATGTCC AAAGGGAGAT TATGAACCAC AGGTCACTGA GGCATCCGAA 
    CATTGTTAGA TTCAAGGAGG TTGTGCTAAC TCCCACACAT TTGGCCATAG 
    TTATGGAATA TGCTGCTGGA GGTGAGCTAT TCGAAAGGAT TTGCAGTGCT 
    GGGAGGTTTA GCGAGGATGA GGCAAGGTTC TTCTTCCAGC AGTTGATTTC 
    AGGAGTTAGC TACTGTCATT CCATGCAAAT ATGTCATAGA GATTTGAAAC 
    TAGAAAATAC TCTCTTGGAT GGGAGCATAG CACCTCGGCT CAAGATATGT 
    GATTTTGGTT ACTCAAAGTC CTCTTTGTTG CACTCTCAAC CGAAATCTAC 
    TGTCGGTACT CCAGCTTATA TCGCTCCTGA GGTCCTTGCT AGAAAAGAAT 
    ATGATGGAAA GGTTGCTGAC GTTTGGTCAT GTGGAGTAAC TCTATATGTG 
    ATGCTTGTTG GTGCGTACCC CTTTGAGGAC CCTGACGAAC CAAGAAACTT 
    CCGCAAGACA ATTACTCGGA TACTAAGCGT ACAATACATG GTTCCTGATT 
    ATGTTCGAGT TTCGATGGAA TGCAGACATC TTCTGTCCCG GATTTTCGTG 
    GCAAACCCAG AGCAACGAAT TACCATTCCT GAGATCAAGA ACCACCCATG 
    GTTCCTCAAG AACCTGCCGA TCGAGATGAC TGACGAGTAC CAGATGAGCG 
    TCCAGATGAA CGACATCAAC ACCCCGTCAC AGGGCCTGGA GGAGATCATG 
    GCCATCATAC AGGAGGCGCG GAAGCCGGGT GATGGCTCCA AATTCTCCGG 
    GCAGATCCCG GGCCTAGGGA GCATGGAGCT CGACGACGTT GACACCGACG 
    ACATCGACGT CGAGGACAGC GGCGACTTCG TGTGCGCATT GTGACGAGGC 
    CGTGAACTTG CTTTCTCTTC TTGGAGTGTG CTGCTCCTTT TGTTGTGCTG 
    CTGTTCATTT CTGAGAGCTC CATTCTGTTG TTGTGTCAGT GTTTGTAAAC 
    GAGGTGCTGT GGATAATCTG AACTCTTTTA TATGTTGGTG TTCTTAGCTG 
    AATTCTTTGC GTCC

    Gene models with high sequence identity

    1. AT4G33950.1 [+] show detail - Protein kinase superfamily protein
      E-value: 2e-143; Score: 505.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Protein kinase, catalytic domain 48.273
    superfamily Protein kinase-like domain 6.8e-84
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMPanther Serine/threonine-protein kinase-like, plant 2.4e-195
    HMMPanther Calcium/calmodulin-dependent protein kinase-like 2.4e-195
    HMMSmart Serine/threonine-protein kinase domain 9.7e-102
    HMMSmart Tyrosine-protein kinase, catalytic domain 0.0000000000064
    Gene3D no description 2.1e-60
    HMMPfam Serine/threonine-protein kinase-like domain 1.4e-70

    See the detailed result >

    AT4G33950.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Curator Summary
    Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.
    Computational Description
    OPEN STOMATA 1 (OST1); FUNCTIONS IN: calcium-dependent protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR