K16041

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	low brightness (PATO:0000327) (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16041

Determination of introduced cDNA(s)

J023090M19 - Rice Full-length cDNAs - Original: J023090M19

full reading [+] show sequence

GGGGCGAAAC CCACTTTTTG AGGATGGCAC AATATCAATT TTCTCCTCTC 
TCAAGCCCCT CCGCCGTCCC CTCTTGCGTT TTGGCCGTCT CGTCTCCGCT 
CCTCGCGCCC TGCGCCGATC TCCATCCCGC GAGCAGATCA GGGTCGGCGA 
TCTCCATCTC GCGAGCAGAG GGGGACGCCG CCGTTGTCCC TGCTGCTGCT 
TCCGCCACAT CCCGCATTTT GAGCAATTAA GGAGGTGTCA ACATTCAGTA 
CAAGAAATGA CTTACATAAG GGATGAAGAT ACAAGACTTG AGACCACTCG 
GGCGAGGCTG TCGAATGTTC TCAAAAGGCA TGAAGATTTG AAAGAGCGCC 
TCTCACGGGA TTCTGATAAA CTGATTTTTG AGCGGCTACA GAGAGAATTT 
GAGGCTGCAC GAACTGCCCA AACTGAAGAG ATCCCAATAG ATGATGAGCA 
GTGGAACGAT GGTTTGCTGG CAACCATCCG TGAAAAGACC AGGTCCATAT 
GGAGGCTGAT AGGAAGGCCA TGGCTAACCA AGCAAATGTT CCAGCAGATC 
CTCAATTCCA GTCAAGGACT ACATATAGAG TAAAAAACAA GGTTATCTAT 
TGTTTGGATG GTGCGAGAAT TGGTATACAG TATGAGACTT ATTTTGCTGG 
AGAACCTTGT GAAATTTATC ATTGTGTTTT GGAAAGCAAG TCATTCCTTG 
AAAAGATGAC TGTGATTGAG CACACCTTAC CTTTCTTTCT GCCAATACGA 
GAAGTAGAAA GTGAATTTCT ATCATCTAAT GCTATTAAAT TTATTGATCA 
TCTTGAAGAG ATTTTGCAGT CTTATGTTGA CAGGAGGGAG CAGGTTCGGC 
TTATCAAGGA ACTATATGGG AACCAAATTG GAGAACTGTT CCACAGTCTC 
TCTTACAATT TGATAGAATT TGTAATGGAG GATTTTGAGT GCAAGGTTAC 
AGTCAGTATC CGATACTCAG ATCTATTGTT CACCCTGCCA AGTCAGGCCA 
GGGTCCTGGC TTGGCCACTT CGCTCTTCGC GGGGAATATC AGTAACTGAG 
CGCAGAGCTA GTCGCTCAGC ATCTGCTCAA CTAGTACCGT TCCGCCTTCC 
CTACGCCGAG GATGCGCTGA AGACCTTGAG TTTGCCAGAA GCGTTTGCGG 
AGATTGTGCT GAGCCTACCC CGTGCTCTGA AGCGGATACT CTCTTCTCAG 
GAAAGTGATT GATGCGTGTA CTAGGAGTTT TTGGTAATGA GACTCATGGA 
CGCAGAAGCT TTCGGTGCTA TATGCAGAGT ATTCGGTGAC CTTACTGACG 
AGATACAAAA TGTTCGGCAG TATTGTTTAG AATATTGTAG TGTACAGTTG 
TTACTGTCTA GAAAATGCGA TTGCTGCGAA GCCAGTTGGA TAACAAGAAA 
CACTGCTTTC AACCATCCAT GTAATATTCG TGCACAGCAA GCACGGAAGC 
AGATTTCATA CC

Gene models with high sequence identity

AT5G10710.2 [+] show detail - INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, n...
E-value: 2e-95; Score: 105.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Centromere protein Cenp-O	1.1e-15
Coil	coiled-coil	0

See the detailed result >

AT5G10710.2

Model type: Protein coding
Computational Description: INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR