K16117

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K16117

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16117

Determination of introduced cDNA(s)

  • J023017L09 - Rice Full-length cDNAs - Original: J023017L09

    full reading [+] show sequence

    Nucleotide sequence: J023017L09 - full reading 
    TTGTGCCAAC CTGTTGCCTC TTTGCAGAAC CAGAAGTTCC TTCCTTTGGT 
    CTAGCTAGCA AGAGATCTTA CTTGTGAGAG GAAGAACAAG AGGAGGAGAG 
    GTAGTATAGC CTTGGCCTTC TTTCTTCAGA TGAATTCAGA AGTAGGAATT 
    CTTGGTTGAG ATTATACTGC CCATGCCAGT GAGCTGACAA GAGAGAACAA 
    AAATGGAGAA AGAACACATC AAGATGGCCA TCCTGAAGCA GGAACAGACA 
    TTCAGACAAC AGGTCAATGA GCTGCATCGT GTGTACCGGG TTCAGAAGCA 
    ACTGATGATA GAGATGCAGA GCATCTCAAC CCAGGCTCAA GCAAAAGCAG 
    ACAACCGAAC CATACCAAGA TTGGAGATGG ACCATCAACA ATGGTACAGA 
    AACTCGGGGG AGAAGAAGGC CCCCGAATTC GTTGAAGATT TCGACCTTGA 
    ACTCACACTG GCAACTGGGG CTGGTAGGAA GCAGGAGAAG CCATCCAACT 
    CGGACTCCGG AGCAACAGTG TCATCGTCGA CTTCTGCTGA ATCAGAGTCG 
    GAGCAGCGGT TCCCTGAGTC CAATGTAGCC CTAAGGTTTC AGAATGAGAG 
    CAAGAGGCAT GATGATCAGC TCATGCAATC TCCTTGGCTC TATCAATGTT 
    TAAGTCTGAA GATGGCATGA TGACTTAGCT ATGATGGGTG GCTTTATGAG 
    TGTTCAAAAA CTCAAAAATC TCAGATAAAA AAAAAAGGCT TCTTTTATGT 
    ATATGTATAT GACACTAATT CAGAGTAACT GGAAGGCTCA AAAGAGTGAG 
    AAAATGCAC

    Gene models with high sequence identity

    1. AT5G67390.2 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (D...
      E-value: 0.0000004; Score: 52.40

     

    InterPro Scan Digest

    See the detailed result >

    AT5G67390.2

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR