K16205

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K16205

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16205

Determination of introduced cDNA(s)

  • J033120E14 - Rice Full-length cDNAs - Original: J033120E14

    full reading [+] show sequence

    Nucleotide sequence: J033120E14 - full reading 
    GTAAGAGTTG GGCGCGAGAG CACCGACGAC CCAACAACAC AAGACGAAGC 
    GAGCGACGAG ACGACCTAAC CCCAAAGCGA AAAAAGTTGC TGCATCCTTA 
    GCGCGCAAGC GAAAGCGAGA GGGAGCTCGC GCGCGCGCGA GGGATCGATG 
    GATCGACCCC AGGTAGTTAC CGAGAACTAT GCCAATCCTG TGACGTGCCT 
    CTTTCATGTG CTCTTCAAGG CTGGGGCGCT GGTGTTCTAC ATCTTGTTTT 
    CGCTCTTCGT GAAGAGCTTC GTCATCATAT TCGTCATCAC CGTGTTCCTG 
    GCGGCGCTCG ACTTCTGGGT GGTGAAGAAT GTGAGTGGCA GGATATTGGT 
    CGGGATGCGG TGGTGGAATG AGATCGACGA CGAGGGCAAC AGCGTGTGGA 
    AGTTTGAGTG CCTCGATGGG GAGGCTCTTG CTCGGATGAA CAAAAAGGAC 
    TCGTGGCTGT TCTGGTGGAC TCTTTACTTG ACTGCTGCTG CATGGATCAT 
    TCTTGGGATA TTTTCACTTA TCAGACTTGA AGCTGACTAC CTTCTTGTTG 
    TTGGAGTTTG CTTGACTCTA AGCCTTGCAA ACATTGTTGG GTTCACCAGA 
    TGCAACAAAG ATGCCAAGAA GAATATCCGG GGTTACTTTG AAGGTCATGC 
    TCAAAATGCG ATCACATCCC GCATCACATC CACCCTGCAA TCAGCATTTG 
    GAGTAATCTA AAATCCGAGC TCCAAACAGC AAGGCCCTTT TCGAATACAA 
    CCATGTAAAA TCTGTCAAAA GGATTAGCGT GCATTATCCC ATTTCCATAC 
    ATTTTTGTTG ACCCAATACA CCCAGTAGGT TGATTTTGAT TGGAAAGACA 
    GAGAACACCT TGTTAGTACT ACTGCCTTCC AAAGGAGTAA AAAAGAAGTT 
    TTTAGCCGAG AATATGTCTT GAGTCTGAGT GTACCCTTTA GGGATTTTGA 
    CCCTGGAACC TGTCTTCCAA TGCAGCTTCT TGTTAATTCC ATATATTATT 
    AATCATTTGC TGTGCTGTAT CTTAACGACA ATTTTCTGTA ATTTTATGCA 
    TTCTCGCAAA ATGCCCGTAC ATGGTTACGT GATTG

    Gene models with high sequence identity

    1. AT1G09330.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-74; Score: 276.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF846, eukaryotic 5.6e-47
    Coil coiled-coil 0
    HMMPanther Protein of unknown function DUF846, eukaryotic 3e-53

    See the detailed result >

    AT1G09330.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF846, eukaryotic (InterPro:IPR008564); Has 518 Blast hits to 518 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR