K16245

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased size (PATO:0000587) (Seed::Shape::small) decreased length (PATO:0000574) (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16245

Determination of introduced cDNA(s)

J013098N06 - Rice Full-length cDNAs - Original: J013098N06

full reading [+] show sequence

GTTCTCAGTG TTGCCTCCGG TTCTTATATA ACCTTCCAGT CCTCTTGCTC 
TTTAACCTGT TCTTGTACAC TTCACATTAG TCCATTTTCC TTCTGTTTCC 
CAAGGTTTTT GTTGCAAGTG CACACTCTTC TCATCAACAA GAGGTGTTCT 
GCTCTGTGTT GGGAGGTCAG GAGACAGTGC TTAGCTTGCA GGCCGGCGTT 
GGATGCTGCG TGGTGAGCTC TGAGGTGATC AAGGTCTCGT TTCACGACGA 
GTAGTAGAGT TCCCATTACC AGAGCTAAAG ATGGAACTTG TCTACTTGGA 
AAGGAGAAAT GGATTCGATG AAGATAGCAC CTCTCCAGAG TTCAGTGGAA 
GGTCAGCAAT TGACCATCAA CAGCTGTCCA TTGCTACACC TGAGGTTGAG 
TCTGATTTGG GACAGACAAT CTACAAGCAG CCATTGCCAT CAGATGAGAA 
GAAAAGCAGG AGCTGCCAGT CATGTCACAA GTCACCATGT TCTTGCAGGA 
GCGAAGTATT CCATTCAGAT TTGTACCCGA CACTTCCTGC GAAGATGATG 
ATACTGGAAT TCCTCATCAG AAGCCTGAGG CACCCAAGAA GAACCCACAA 
TGTGAGTGAT CTTGATGACA TGATCAGCAA TGGAGCTAGC ACAGGGAGTG 
TAGTTCTTGG TCCTTCGGAG AAAATGATGT TGGATTCTTT GCATTCACTT 
GTTGATGCGA AAACGAGGCC AAAAAGTCCT TCATTCTTCC ACTCAGGAAC 
CAAGATGAGA AAAGCTCGGT CAAAATCCCA CATCATAACA CAGTCAGAGA 
TACTGAAGCT GATATCTCCT GAGACATGGG AGATCTCCTC CCCTGGCGTG 
TCGCCGTTGA AGAAGAGCAC AGCTGAGTTG AGCATGCATG AGAAGATGGT 
GTCCTCAGAT ACACCATCCA TGAGTTCAAA TCAACCTGTT CTGTCCTCAT 
GTCCATCTTC TTTAAGTGCA GGGCTTCTAC AATGCATATG GAAGGATGGG 
CTTCCACACT TTGAACTGTC ACTGGACAAT CCTATGGCAG TATACACTGC 
CAATCCTACA AAGGCCCATG ACAATGACAA GCCCCTTGAC TATGTCTATT 
TGTTCCATTC AGGAGAGCAA GGGAGAAAAG ATTGGTTAGG CAACTCAAGC 
AGTGTATCAC GGCTTGTCGG CAAGATGAAG GTGTCAAGTT CTTTGGTTCT 
GAACCCAGAC AAGTCTACTT CTATGGAGAC AGAGTTTGTC CTGTATGGTT 
CTCCGGATGA CTACCTGAGG CAAATGCAAA GTTCATATGG TGTTACAAAA 
GGCAAGGGGC TAGCCAAGAG AGTGGCAGAC ATTATGAAGC CATCCAATTT 
GAACTCTAGT CCGAAACATG TGTGGAAGTT TGGCAAATCG TCCTCCCAAC 
AGATTGATGA GATGACTGAA ATACCTGAAG GTGAACAGTG CAGTGCCAAA 
GAATCAGTCC TCAAGAACCT CGTCGCTGAT GATTTGCCTA CCAACCAGGA 
GATAGCAGCA ATTGTAGTAC GAAAACAGCG GCGCGAACGT CGGAAATCAC 
CTGTTCTTGG TGGATGGGGG CTCAAGTTCC TTGAGAAAGC TGGAGCTACT 
CATCCAGGGA GCACTGAAGA TGGTGATGTT CAGAACAAGA AAAATAATGC 
AGGGAGTGTA AGTGCCATAT TTCCCCGAGG CTACCATGGC GGCGCGGCTT 
CCAAGAACGG CAGCCCTGCC AGCCTCATCG GAAGATGGAG GTCCGGTGGG 
CGCTGTGATT GTGGCGGATG GGATATTGGT TGCCCAATCA GAGTACTGCA 
GAATGATGGC TGTGGTACTT CGCCTCAGGC AGAGTCCCAG TCACAGGACA 
GGAAATCAGT AGAGCTCTCA GTCAAGGGTG CGAAGAAGGG ACCAATGTTC 
AGGCTTGTGA ACATCACAGA TGACCTGCAC ATCATATACT TCGACTCCAG 
TCTTTCGCCT TTGCAATGCT TCTCGGCAGG AATAGCGATT ATCCACAGCC 
AGGCGCCTCA CCTCTATCCA AAACTCTGAA GACACATTGT TGGTCTTGTC 
TAATATATAG AAGATTTGAA ACATGTCTTG ATCTTGCATA TTTCCTTTCG 
CTTTGGTTTC ATAAAGAAAA GGTGCAGGTT ATCCTCATGT TAAATTGTTA 
ATATCCATTG TTAATCTTGT TTAACGCTAT AATGTTTTAT AAGCTGGAAG 
GAGTAGGATA TTAGGATATA TCTTACTAAT GT

Gene models with high sequence identity

AT2G33360.1 [+] show detail - Protein of unknown function (DUF3527)
E-value: 3e-50; Score: 197.00

InterPro Scan Digest

See the detailed result >

AT2G33360.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF3527)
Computational Description: Protein of unknown function (DUF3527); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT1G04490.2); Has 134 Blast hits to 133 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 2; Plants - 120; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link: InterPro Scan - TAIR