K16408

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K16408

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16408

Determination of introduced cDNA(s)

  • J023076N12 - Rice Full-length cDNAs - Original: J023076N12

    full reading [+] show sequence

    Nucleotide sequence: J023076N12 - full reading
    GGGGGAAAAA AAATGTCATC TTCCACCTCC GTCCTTTCCC CTCTCCTCGC 
    TCACGCTCAT GGCCGCGCCT CTCCCACCTC AAGGGCGCAA CCTCTCATCG
    CTTCCCGGCT CAACCTCGCC GGATTCTCGG CCTCCTCTCC ACGACGGATT
    CTCCCGGCAC CTCGCGCGAG CGGCGGCGGC GGCGGCGGGG AGGAGGAGGA
    CAGCCGCGTG CAGGAGCTGA GGGTGCCCGG TTCTTGGCTC ACCCCTGCAG
    GAGCAGCGCA GGAATCCGAA TGGCTGAGGG AAACACTGCA CAAGTGGCTC
    GACGACGAGT ACTGCCCGGA GCCAGCCAAT GTGGACATCA GCAACACCGC
    TGCGCGGTCA TTCTACGAGT CCCTGACGGC GAAAGAGTCT GACCTGGGAG
    AGATCTTGCT GAAGATGGTG GGAGATCTGC AGAAGCTGTC ATACAAGGAG
    AGCTTCCACG GCGCGTTCTC GGCTGCCAAT GCCGCGGTGA GTTTGATATC
    GCAGAGGATG GAGTCATCAT CTGATGACTG ATCATTGCCA AGCAATTGCT
    AGATGGGTTT TGCTTTTGAA CCATCCTAGC AGGGAATTGG CATCTCAGAT
    CTTTGTCTAC TGAATTGAGT TCATCAGGTT TCTTTGTGTG CCTGGGCGGG
    CGCTTGGTTG AGAAAATTGA AAGATGATGT GATCATGTAA TTGTAACTTG
    TAAGTACTTG CAACAGTCAC ATGCGATTTT GAGTAAAATA CGCTAATGGT
    TCTTAAACTT

    Gene models with high sequence identity

    1. AT4G03150.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 1e-36; Score: 149.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G03150.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR