K16607

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K16607

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16607

Determination of introduced cDNA(s)

J033102H16 - Rice Full-length cDNAs - Original: J033102H16

full reading [+] show sequence

GGGGGCGTCC AAATCCGCCG CCGAATTCCC CACCCGTCGC GTCCAAAATC 
CAAATCCGCC GCCGCGATCG AGGCCGACGA GGAGAGGTTG AGGTTGAGGT 
GAGAGCCATG GTGAGCGCCT TCTTCCTGCT GTGCGGGTGC GTGGACCAGG 
CGAGCGTCGC GGTGGTGGAG AAGTGGGGCC GCTTCCTCCG CCTCGCCGAG 
CCGGGCCTCC ACTTCTTCAA CCCGTTCGCC GGCGAGTTCG TCGCCGGGAC 
GCTCTCCACC CGCGTCCAGT CGCTCGACGT CCGCGTCGAG ACCAAGACCA 
AGGATAATGT CTTTGTTCAG CTTATCTGCA CAATCCAATA TCGGGTTGTT 
AAGGAACATG CTGATGATGC ATTCTATGAG TTGCAGAATC CCCAACAGCA 
AATTCAGGCC TACGTCTTTG ATGTGGTCCG AGCTATAGTT CCGAGAATGA 
ATCTTGATGA TCTTTTTGAG CAAAAGAATG ATGTGGCGAA AGCTGTACTT 
CAGGAGCTAG AAAAGGTGAT GGGAGATTAT GGTTACAGCA TTGAGCACAT 
TCTCATGGTT GACATCATCC CTGATGCTGC TGTACGCAGA GCAATGAATG 
AAATAAATGC AGCACAAAGG CTTCAGCTTG CAAGTGTCTA CAAAGGAGAG 
GCGGAGAAGA TTCTTCTGGT GAAGAAAGCA GAAGCAGAGG CAGAGGCAAA 
ACACCTTTCC GGTGTCGGCA TTGCTAGACA GCGGCAGGCG ATAACTGATG 
GCCTGAGAGA GAACATCCTG AACTTCTCGC ACTCGGTTTC AGGCACCTCA 
GCAAAAGAAG TCATGGATCT CATCATGGTC ACGCAGTACT TCGACACCAT 
CAAAGAACTT GGGGATGGCT CGAAGAACAC CACGGTGTTC ATACCTCATG 
GCCCAGGCCA TGTCAGGGAT ATCAGCGAGC AAATCCGGAA TGGTATGATG 
GAAGCGTCCT GCAGCAACGT GTAAATCGGT ATCGAATGCG GAACCAAGGT 
TGGGGGTGGT TCAGATGGGA GGTCCTGTTT ATAGTGAATA GTACGAATGA 
ATGCTAGTAG CATGTGTTGT TTGCACGCGC GCCCTGGAGT TGTATGCAGT 
GGTAGATAGA GTTCGAGTTT TGGCATAATA ATATTGTCTG AATTTTATGT 
AAAAGAAAAT CACATGTCTT CCTTTTGTGA GTTAAAAGTT GCACCGATTT 
ATGCATGGC

Gene models with high sequence identity

AT5G51570.1 [+] show detail - SPFH/Band 7/PHB domain-containing membrane-associated protein family
E-value: 4e-120; Score: 428.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Band 7 protein	1.3e-29
HMMSmart	Band 7 protein	3.6e-25
HMMPanther	STOMATIN-RELATED	1e-74

See the detailed result >

AT5G51570.1

Model type: Protein coding
Short Description: SPFH/Band 7/PHB domain-containing membrane-associated protein family
Computational Description: SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G62740.1); Has 5870 Blast hits to 5870 proteins in 1885 species: Archae - 189; Bacteria - 4209; Metazoa - 145; Fungi - 209; Plants - 268; Viruses - 20; Other Eukaryotes - 830 (source: NCBI BLink).
Link: InterPro Scan - TAIR