K16815

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K16815

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16815

Determination of introduced cDNA(s)

  • J013095L11 - Rice Full-length cDNAs - Original: J013095L11

    full reading [+] show sequence

    Nucleotide sequence: J013095L11 - full reading 
    GACGTTGGCG ATGCCTTCGA GCTGCTGCAC GACGAGCCCC ATGGTCGGCC 
    GGTCGCCTTC CTCGTCTTGA ATGCACCAGC CCGCGACCTT GCAGAGTCTC 
    TCAACCTCCT TCGGGTCGGC ATCCTTGGCC ACCCTCTCGT CGACCAGCCC 
    GGCCACGTCG CCTTCGTTTA GCTTGACCAC GGCATGAACC GGGAAGTAAA 
    TCCCAGGGCC GCCCTCCGAC GACGACGACG GCGCGGTGCT GTTCCGCCGG 
    CCCGAGACGA GCTCGAAGAG CAGGAGCCCG AAGCTGTACA CGTCGGCTTT 
    TGCGGTGACC GGCGTGCCGG CTAGCCACTC CGGCGCGAGG TATCCCACCG 
    TGCCCCGCAT GGTGGTCAGG ACGCTGCTGA AGTCGCGGCC GACGAGCTTG 
    GCCATGCCGA AGTCCGCGAG CCTCGCCGCC ATCTCCTGAT CGAGGAGGAT 
    GTTCTCCGGC TTGACGTCGC AGTGTATGAT GCACTCCCTG CACTTCTCGT 
    GCAGGTAAGC CAAGCCCCGT GCCACACCAA CCGCGACGTT GTACCGTTGG 
    CTCCAAGTCA GGGTCACCTG CTTGGAGTCG GGGCCGGAGC TGGAGCCGCT 
    CATGACGAAC AGGTGCGAGT CCAGCGAGCC ATTGGCCATG TAGTCGTACA 
    CGAGCGCCCT CTTGTTTCCC TCGCAGCAGA AGCCACGGAG TCGGACGAGG 
    TTGACGTGCT GGATCATGCC GAGCGTCACC ACCTCCGTTC TGAATTGCTT 
    CTCGCCTTGC CGGAGACCGT CGAGCTTCTT GACGGCCACG GGCGTCCCGT 
    CCGGCAGCGC GCCTTTGAAC ACCGTGCCGA AGCTCCCGCT CCCGAGCTTC 
    TCCGAGAAGT CCCTCGTCGC GGTCTTCACG GCATGGTAGT CGAGCAGCAG 
    CAGCGACCCC TGCACCGCCG TCACCTTGCC CCTCCTACGC CGCATCCGCA 
    ACACCGCCGC CACCGCCACC ACGGTGACGA GGCTCGCCAA GAGCAGCATC 
    ACCGCCGCAA CGACGCTTCC AAGGATTACC ATCGATTTCT TCCACGAGTG 
    CTCCGTCGAC GACGCCGGAA CCTCCGAGTG GGCGACACGG AGGTGAAGCA 
    CCGCTCCGGC GAGGCCAGGA TCGCCTTGGC CGTTCTCATT AGCCGCGTAG 
    GCTTTCATGT TGACGAGCTC GCCGTTCCAC ACGAGGCACT TCGCTCCGTC 
    GTGAACGTAG GCCGTGCAGG AGCAGTCGAC CAGGCAGGTG TGCGCGCACG 
    CCTTGTCGTT CCCAGCTCCG GCCGGCGCCT CCACGGAGCC ATTCGGGAGC 
    CGCACGGTGT ACGGCAGCGC CAGGAACCCG TCTCCGTGAC ACTCGAGAGG 
    GTGCCGCCTC ACGCAGCCTC CGGCGGCGTT CTCCAGCCTC CACTCCTCCG 
    ACGACCGCGG CTCGAAGCCG GCGGGGCACC GGCACTCCGG GTTGGTGGCG 
    TTGCTGCAGA CTCCAAAGGG CCCGCACGAG CCGTACACGT CGCACGCGTC 
    GTGGGGCAAC GAGCAGAAGA GGATCCACTT CCCCGCCGTC TCGCTCCACT 
    GCCGCCGCCG CATCTGCCCG TTCACGTCCA GCATGAAGTT GCCGACGGCG 
    CCCGGCAGCC GGTCGCGGTA GCTGAAGAAG TTGACGCTGG CGTTCGGCGC 
    GTAGGGGACG CCGGTGAAGT AGCCGGACCG CATCTCCGGC ACGTTCGCGA 
    AGATCTCGCC GTCCCAGAGG CCGGTCGTCC AGTACCGGTG CTCGCCGCCG 
    GCGAGGAGGT CGAACTTGGC CAGCCCGCGC GCGTCGATCA CCATGGAGAA 
    CGCGCCGGGC GCCGGGTTCT CGGAGTCCGT CCACGACGTG AGGAAGCTGT 
    GGACGCCGCG GCCCCTGTCG TAGCCGAGCC TGGCTCCGGG GAGCCATGTG 
    TCGGTCGGGT GATCAAAGCT CTGCCACGCC ACGTGCGTCG TCGTAGTCGA 
    CGACGGCGAT CGCGACCGCG ACCGCGTCGC GTTGCTGTTC ACCACGAGGT 
    TGCCGTCGTC CTGGAGCGTG GCGACGGTGG TGCGCGGGGG CGACGGCGAG 
    GAAGACGCGG ACGCGTTCGA CGACCACAGC AAGGTGTTCG ACGGCGCCGT 
    CGAGAACAGC CGCAGATCGC CGTGGACGCT CAGCTCGAGG TGGCAGCTCG 
    ACGGCTCAAG AATCGGGCGC TCACGGTTGG CAACCCAAAC AACCGTCTTC 
    TTGGAGATCT TCTTGTACCA GATGCCAAGG TAGTGCTTGT TGGACTTTCC 
    CGGCGAGAAG AGGCCGAGCT CGAAGTTGCC GCCATTGGAG ACCAGCGTCT 
    GGTTCCACAG CAGAGACTGG CCTAGCGTGA GGGTGTCAAT GGCGGCCGTG 
    GGGAGATGTA GGTTGAAGAA GAGCAGCAGG AGGACGCCGA CGAGGAGCAT 
    GGTGGCGAGT GCCGAGTGGC AACCACAATT CTTACTTACT TAGCGAAGAG 
    TGATTAACTT GTTTGTTGGC CTCCTATATA GTACTCATAG GTATCTGTCA 
    TGGCATTGAT TGAAGGGCCA AGCTTTGTTT GGCCATCATG AATCCACAAG 
    TTATGTATTA GCCGTCAGCC GGTCATGGCA TGATGCAGCA TTGGCTTCTT 
    CAACGATGTT TACGTGCCAA TGGACTACTT TTTTACAGTT TATTTGGATT 
    TTAGACGATA TACAAACCGC GACTTGTATC CAATCAGTGT GACAATAAGT 
    TTTTGGTGGC AGTAAGTTTC AGCGTGGC

    Gene models with high sequence identity

    1. AT2G19130.1 [+] show detail - S-locus lectin protein kinase family protein
      E-value: 0; Score: 632.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Protein kinase, catalytic domain 36.612
    ProfileScan EGF-like, type 3 10.871
    ProfileScan Curculin-like (mannose-binding) lectin 18.336
    ProfileScan Apple-like 7.974
    Gene3D no description 2.3e-21
    Gene3D no description 9.4e-47
    HMMPanther S-RECEPTOR KINASE 3.2e-175
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 3.2e-175
    HMMSmart Curculin-like (mannose-binding) lectin 1.9e-32
    HMMSmart Serine/threonine-protein kinase domain 1.4e-30
    HMMSmart Tyrosine-protein kinase, catalytic domain 5.7e-25
    HMMPfam Serine/threonine-protein kinase-like domain 2.1e-45
    HMMPfam Curculin-like (mannose-binding) lectin 8.8e-31
    HMMPfam S-locus glycoprotein 3.1e-25
    HMMPfam PAN-2 domain 0.000000000000029
    superfamily Protein kinase-like domain 6.2e-74
    superfamily Curculin-like (mannose-binding) lectin 1.2e-24
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0

    See the detailed result >

    AT2G19130.1

    Model type
    Protein coding
    Short Description
    S-locus lectin protein kinase family protein
    Computational Description
    S-locus lectin protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 4 (TAIR:AT4G00340.1); Has 116366 Blast hits to 114909 proteins in 4332 species: Archae - 99; Bacteria - 12770; Metazoa - 42761; Fungi - 9470; Plants - 34242; Viruses - 402; Other Eukaryotes - 16622 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR