K16911

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K16911

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K16911

Determination of introduced cDNA(s)

  • J033067P07 - Rice Full-length cDNAs - Original: J033067P07

    full reading [+] show sequence

    Nucleotide sequence: J033067P07 - full reading 
    GACCTTTTGC TCCCCACCAC CACCTACCTC TCCCCTCTTA TTCCTCCTCG 
    CCTCCTCCCC GCATCCGTAC ACCGGCGCGC CGCTGAATTC CTAACCCTAG 
    CCCTTGCCTC CGCCTCTCCT CCATGGCCGC CGCCCCCGCG TCCCCGTTCG 
    CGTAGCCCTC CATGGGATCC GCCCGCGCCG CCGACGACGA AGGGAGGAGA 
    CCGACCGGGG GAGAAGAATG AGGTGCTGCG CCAGCCGCGT GGCGTCCGCC 
    GGGTGCCGGG CCATGGGAGT TGCGGGTGGG GTGAAGGCGA CGTCGCTCCG 
    CAGCAGCCGC CGCCGCCGCG AGCTGCCGTC GCCGGCCCCG TTCTCCGAGC 
    CCTTCACCGA ACGCCCGGCG ATCCTATATA ATTAACTGGC CGCCCCGCGC 
    CGTCTCTCCT CCGCTGCATC GGTCGCCGGC TCTAGCTGCT GACCGCCGTG 
    CGTAGCGGGC GCCCGCGCCG CTCCACGCGC TGTCCCGGCG ATCTCGCCTG 
    GCTCATCTCG CTCTGCTTCC TCTCTGCTTC CTGATTCGTT CGTGCGCGTG 
    GGGTGATCTG AAATGGAGGT GTTCGGCGAT CTGGATAAGG TGGACGATGC 
    TGAGTGCGTG GAGGTGGATC CGACCAGGCG GTACATACGC TACAATGAGG 
    TGCTAGGGAG AGGAGCTATG AAGACTGTTT ACAAGGCATT TGATGAGGTT 
    GAAGGCATTG AGGTTGCATG GAGCCAAGTG GAGATAGATG AGGTTATGCA 
    ATCTCCAGAT AATCTTGAAC GGCTATACTC TGAAGTTCAT CTACTAAAGT 
    CTCTCAAGCA TGAAAACGTA ATGAAGTTCT ATAATTATTG GGTTGATGAT 
    CAAAAGAAGA CAATTAATGT TATTACAGAA CTTTTCACAT CTGGAAGTCT 
    CAGGCAGTAT CGTCAGAAAC ATCCACGTGT TGACTTGAAG GCAATAAAGA 
    ATTGGGCTAG ACAGGTACTC CGTGGGCTGG ATTACCTGCA CACCCACCAA 
    CCTCCAATTA TCCACAGAGA CCTGAAGTGT GACAACATTT TTGTCAATGG 
    GAATCATGGA GAAGTTAAGA TTGGAGATCT TGGATTAGCC ACGGTGATGC 
    TAACGCCTAG AGCAAAAAGT GTTATTGGTA CTCCTGAATT CATGGCGCCT 
    GAGCTATATG ATGAGAATTA TGATGAACTT GTTGATATAT ACTCATTTGG 
    AATGTGTATG TTGGAGATGT TCACTCTTGA GTATCCTTAC AGTGAATGTA 
    CAAATGCAGC TCAAATTTTT AAGAAAGTAT CTAAGGGTGT CAAGCCGGCT 
    GCTCTGGCTA AAATCACAAA TATTCAGGCA AAACGATTTA TTGATAAATG 
    TTTAGTTCCT GCTTCTGAAA GGCTGTCTGC CAAAGAACTA TTGCAAGACC 
    CCTTTCTTTG CTCTGATAAT TCTAGTGTTC TTGTTGGCAC TAAGTTTCCG 
    TCATCATTAC CCAAATCAGT AGATGTCTCT TTGGAAGCTT TGCACATGGA 
    TGTTGACACC AATGAATCTA TGTGTACTAG CACATGCAAG AGAAATGATC 
    TTGGTGGTCC ACATAGATCT GTGTTGGAGT TCACGCGAAC TAACAAAAAC 
    ACAGAGCTAA AGCTAACAGG CGAGAAACTT GATGACAATT CAGTATCACT 
    GGTTTTGCGA ATTGCCGATT TGTGTGGACA TGCAAGGAAC ATTCATTTTC 
    TCTTCTACTT GGATTCTGAT ACAGCTATGT CTGTTGCTGC TGAAATGGTC 
    GAGCAGTTGG AGTTAGCAGA CTGTGATGTT ACTTTCATTG CTGATTTTAT 
    TGATCTTTTG ATAGTGAATC TTGTCCCTGG TCAGCAGCTG ATGAATGATG 
    CAGTAATGAG TACTTCCAGC GAATCTAAAA TGGGTGAAAG TGAGCACGTA 
    ATTACTTCCC AGCAGCATCC ATCGGAGTTG ACACATGATT ATGTACTAGT 
    TGAAGGTATG ATGCATTCGA AAGAAGCCAA TGCATCACCA AGTGATTATA 
    TTGATTCTCT CTTGAATGCA ACCAATCTAG GAGGACCAAA TAGCTCTGAA 
    GGGTCAGACA TTTCTGTTCA GCTTGATGGG AGTTCCAAAA GTCTTAGTGA 
    GTATGGCGTT GACGAATACA GGACACTGGA ATGTGGTGCG TACAAAGGAA 
    CCGATAAACT GGGCTGCAGA CATCCGTTAA GTAATGGTTC AAGTAATTTT 
    GCAATCTTTC AGATGGATCA AGCATCACAT CACTCGGAGT TGGTGATCGG 
    TGCATCGGTT TCAATTACTG AAAATCGAGA TGTGTTAAAT GGAGAGCTTG 
    GTCTGATTGA AGCTCAGTAC GAGCAATGGT TTCGTGAATT AACAAGGATG 
    CGGGAAGGAG CTTTGGAAGG AGCCCGGAAG AAGTGGTTAC CAGATAAATG 
    ATGATGTATA AAGTCAAGTT TTGTGTTTCA TCTGAACATC ATAAGAAAGA 
    ATGTTCAGAT GTTCATGTTC CAGCTTCCTG GTTCAACATT TCTTGTGTTT 
    CATACATAAT TGAGCAACGT TAATAATTTT TAGTTTAAAC GTTGCTGTAG 
    TCTGCAATGC TGTAAAGCCA GCTTGTTGGT AATTATTAAG CCGTTTGGCA 
    AGAGTTTACA GCATGATATT TTGATGGTGT T

    Gene models with high sequence identity

    1. AT3G18750.3 [+] show detail - with no lysine (K) kinase 6
      E-value: 2e-146; Score: 516.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart Serine/threonine-protein kinase domain 5.5e-61
    HMMSmart Tyrosine-protein kinase, catalytic domain 2.5e-14
    HMMPfam Serine/threonine-protein kinase-like domain 8.2e-52
    HMMPanther SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO 1.7e-165
    superfamily Protein kinase-like domain 2.2e-66
    ProfileScan Protein kinase, catalytic domain 41.517
    Gene3D no description 1.5e-23
    Gene3D no description 1.6e-45
    PatternScan Serine/threonine-protein kinase, active site 0

    See the detailed result >

    AT3G18750.3

    Model type
    Protein coding
    Short Description
    with no lysine (K) kinase 6
    Curator Summary
    Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.
    Computational Description
    with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2).
    Link
    InterPro Scan - TAIR