K17040

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17040

Determination of introduced cDNA(s)

J023100F02 - Rice Full-length cDNAs - Original: J023100F02

full reading [+] show sequence

GATTCCCCTT CCTCATCTCC GCCTCGCCTC CACCGGCCGT GATCTCGCCG 
CCGGCGCCGC CCCGCCGCCC CTGAGGCCTA CTAGTAGCGA CCTACAAGTA 
CCCTGTTTTG TACCATCCTA GGAGCGAATC CTCCCCCTGC GGCAGCGGTA 
GCAGATCGCG ATGGCCGCCT CGGCGCCTCC TCCGGCGGCG ACGAATCCAC 
CGGCTTCGAC CGCGCCCACG GAGGACGGGG AGGTGGAGGA GGGTGCCACG 
CCACCGAGAA CTTCTGCGTT GGGGACGGCG AACTGGGGTA CCGCCACCCT 
CGTCGGCGTC TTCGCCGGGC TGCTCTACGG CGGGAGCAAG GAGGCCAGCG 
CCTCTGTCAG CAAAGACGCT GAAGTGATGT TGAAGATGGG GAGCACCACA 
GACAAGCGTG AGCAGTATAG ATTGATGAGA GATGCAATGG AGAAAAGATT 
CATCCGGGTT GCCAAAGGAT CGCTAGTTGG TGGTGTTCGC CTTGGGATGT 
TTACTGCAAC TTTCTTTGGC ATACAGAACC TTCTTATTGA GAAACGTGGG 
GTGCATGATG TATTTAATAT AGCTGGAGCT GGCTCGGCTA CTGCAGCTGC 
ATTTGGACTT ATATTGCCAG GTTCACCAAT GTGGCGTGCA AGGAATGTAT 
TGGTTGGATC AGCTCTTGGT GCTGGAGTCT GCTTTCCCCT TGGTTGGATA 
CAGTTGAAGC TGGCAGAGAA AGCCAATCTT GAGATGGCAA GTTCGAAACC 
AACAGATTTG GTGGAGGAAC AAGGTAATCA AAGCGGCGTT GGTGCCGCTA 
TAGAACGACT TGGGCGCAGC CTAAAGAAGT AAAAATTTGG ACCATCGAAG 
GACCTTTTTT TTTCTCATAA TCTGTGTGCG TTCCTGAAGA CCGCAGGAGG 
AACCTGTTTC ATGGGCTGCA CTACTTCAAT TTTTTCTTCT TTCATGTGCC 
TCACGCTGTA GTGCTGTCAA ACTTTGAAGC AGTAACAGCA AGGGCCACAC 
GGAGCCTCCG TTGTGGGGGA AAAAAGAGCA TTTTTGATAA AAATATCGTA 
TTCGTTGGAT GTG

Gene models with high sequence identity

AT5G63000.1 [+] show detail - Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
E-value: 5e-66; Score: 248.00

InterPro Scan Digest

See the detailed result >

AT5G63000.1

Model type: Protein coding
Short Description: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Computational Description: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 40 Blast hits to 40 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR