K17051

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17051

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17051

Determination of introduced cDNA(s)

J033046D22 - Rice Full-length cDNAs - Original: J033046D22

full reading [+] show sequence

GACTTCTCCA CGCTCTCTCT CTCGCGCGCG CAAATGGCGT CGTCGACCAG 
CCTCGCCGCG CTGCCCTCGC AGCTCGCCTC CCCCGCCCGC CGCGCCGCCC 
TCTCCCGGTC CGCTACCGCG CGGCCGCGCC ACCACCACCA CCCCCTCCTC 
CGCGCACCGC CCAAAGGCTG CAGGCTGGTG GGACCTGCAA CGCGCAGACG 
GCGGTCCCGA CCAGCATTGC GCAGGGCACG CCCGTCAGGC CGACCAGCAT 
CCTGGTGGTC GGCGCCACCG GGACGCTGGG ACGGCAGGTG GTCAGGCGGG 
CGCTGGACGA GGGCTACGAC GTGCGCTGCC TCGTCAGGCC CCGCCCGGCG 
CCGGCCGATT TCCTCCGCGA CTGGGGCGCC ACTGTGGTCA ATGCCGATCT 
CAGCAAGCCA GAGACCATTC CCGCGACGCT TGTTGGTATT CATACCGTCA 
TCGATTGTGC TACAGGGCGT CCCGAAGAGC CCATTCGGAC GGTAGATTGG 
GAAGGAAAGG TTGCTCTAAT ACAATGTGCT AAGGCCATGG GAATTCAAAA 
GTATGTGTTC TACTCTATTC ATAACTGTGA CAAGCACCCG GAGGTTCCCT 
TGATGGAAAT CAAGCATTGT ACAGAGAAGT TTATTCAGGA TGCCGGTCTG 
GATTATCTCA TCATCCGTTT GTGTGGTTTC ATGCAGGGCC TAATTGGGCA 
ATATGCTGTG CCCATACTAG AAGAGAAGTC AGTATGGGGA ACTGATGCTC 
CTACCCGGAT TGCTTACATG GATACCCAGG ACGTTGCTCG ACTGACGTTT 
ATTGCCATGC GGAATGAGAA GGCTAGCAAG AAGCTCTTAA CTTTTGCCGG 
ACCACGTGCC TGGACAACTC AAGAGGTGAT TACACTGTGT GAGCGGTTGG 
CTGGCCAAGA TGCCAACGTT ACTACTGTCC CTGTTGCAGT GTTGAGATTT 
ACTCGTCAGT TGACACGGTT CTTCCAGTGG ACAAATGATG TGGCTGACAG 
ACTGGCATTC TCAGAGGTCC TCTCCAGTGA CACAATTTTC TCAGTTCCAA 
TGAATGATAC ATACCAGCTT CTTGGGGTAG ATTCAAAGGA TATTCTCACC 
TTAGAGAAGT ATTTGCAAGA TTACTTCACT AACGTTTTAA AAAAATTGAA 
GGATCTCAAG GCACAGTCCA AGCAAACTGA CATATTCTTT TGACAAGAAG 
GATATCTACA AACCTATGGA TATATTTTCT GATGCAGATC TGTGCTTCAA 
AACACAGATG AGTGAATACA AATTTTCTTG TATATCTGTT GTTGTGGTAT 
GTGCAAGAAG TGCATGCTAT TAGGTTATGT CTACAGAATC CCAACTATTG 
AACTATCAGG TCATGTATAT AGGATCTCAA CTATTCAACT ATCAAAGACC 
TGGAGTTTGT GTAGAGC

Gene models with high sequence identity

AT4G35250.1 [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
E-value: 1e-173; Score: 606.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	UNCHARACTERIZED	2.9e-55
HMMPanther	NITROGEN METABOLIC REGULATION PROTEIN NMR-REL	2.9e-55
HMMPfam	NmrA	4.1e-25
superfamily	NAD(P)-binding domain	2.2e-56
Gene3D	NAD(P)-binding domain	3.3e-51

See the detailed result >

AT4G35250.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR