K17317

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased size (PATO:0000587) (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17317

Determination of introduced cDNA(s)

J013107B22 - Rice Full-length cDNAs - Original: J013107B22

full reading [+] show sequence

GGTAGTGCAA TTCACTTATA CACGGAGTTT AATTAGTTTA TTGCCTTCTA 
CAATGGATAG GATCTTCGCC CGTTTCTTTT GCTTCCTACT GATTGCGGCA 
GTAAGCCATG CAGCTGATCT GTCCCCCGAG CAATACTGGC GATCCATCCT 
CCCTAACACC CCAATGCCAA GCTCCATCTC CCAACTTCTT AACTACCCTT 
ACTTGCCTGC TGTTAGATTA CCTCGCCGTA CGGATGCTGG TCAGCGCAAC 
TACAAATCAT CAGTTTCACA TGTGGCTGAA CGATCTCACC GTGTAGATGA 
TGGCCAACGC AACTACAAGT TATCAGCTTT ACCTGCCACT AATGAACTAC 
CTCACCGTAC GGATGCTGGT CAACGCAACT ACAAGTCATC AGTTTCACCT 
GTGGCTGAAC TACCTCACCG TGTAGATGAT GGCCAACGCA ACTACAAGTT 
ATCAGCTTTA CCTGCCACTA ATGAACTACC TCACCGTACG GATGCTGGTC 
AACGCAACTA CAAGTCATCA GTTTCACCTA TGGCTGAACT ATCTCACCGT 
GTAGATGATG GTCAACGCAA CTACAAGTTA TCAGCTTTAC CTGCCACTAA 
TGAACTACCT CACCATACGG ATGCTGGTCA ACGCAACTAC AAGTCATCAG 
TTTCACCTGT GGCTGAACTA CCTCACCGTG TAGATGATGG TCAACGCAAC 
TACAAGTTAT CAGCTTTACC TGCCACTAAT GAACTACCTC ACCGTACGGA 
TGCTGGTCAA CGCAACTACA AGTCATCAGT TTCACCTGTG GCTGAACTAC 
CTCACCGTGT AGATGATGGC CAACGCAACT ACAAGTTATC AGCTTTACCT 
GCCACTAATG AACTACCTCA CCGTATAGAT GCTGGTCAAC GCAACTACAA 
GTCATCAGTT TCACCTATGG CTGAACTACC TCACCGTGCA GATGATGGTC 
AACGCAACTA CAAGTTATCA GTTTCACCTG CTGCTGAACT ACCTCACCGT 
GTAGATGATG GTCAACGCAA TTACAAGTTA TCAGTTTTAC CTGCCACTGA 
ACTAGTTCAC TATACAGATG GTCAACGCAA TTACAAGTCA TCAGTTTTGG 
AGACGCCAGA ACTTCTCAAA GACCCCGACA TGGCGCTCTT CTTCCTTGAG 
AAGAATCTTC AACAAGGTAA AAAAATTAAT AACGCCCTCC ACTTCGCCAA 
CTTGTTGGCC ACTACGAACT CCAAGTTCCT GCCACGAGGC AAGGCGGACT 
CCATCCCGTT CTCCTCTAAA GAACTACCCG AGATCCTGGA CCGGTTCGGG 
GTGCGGCCGG GCTCCGACGA CGCGGCTGAG ATGAGTGCTA CGCTGCAGGA 
CTGCGAGCTG CCGGCGAATA AGGGAGAGAA GAAGGCCTGC GCCACGTCGC 
TGGAGTCTAT AGTCGACTTC GTCACATCCA GCTTTGGGGC CAGTGACGTC 
GACGCCGCCT CCACCGTTGT GCTCAGTAAG GCGGTGGAGT CTTCTTCGCT 
GGCGCAGGAC TACACGGTGA GCGGCGTGAG GCGAATGGCC GGAACCGGCC 
AGCTCATCGC TTGCCATCCG GAGTCGTACC CGTACGCTGT GTTCATGTGC 
CACCTCACAG AGGCGACGAC GAGGGCGTAC AAGGCCTCAT TGGTCGGCAA 
AGATGGTACT GCGGTGGAGG CGGTCGCCGT GTGCCACACC GACACGTCGG 
ACTGGAACCC AGAGCACGCT GCCTTCCATG TGCTCGGCGT CAAGCCTGGG 
ACTGTGCCTG TCTGCCACTT CATGCAGCCT GACACTGTCG TCTGGACCCG 
CAGGGGCTGA TGTATGTATG TATGCCATAT AGTACCTACT TCATCGTACT 
GTACTGCGTA CGCATGCTGC CAGCTGCTTT GCATACCTTG CTGCTGGAGA 
TATATAATTA ATATCCAGCA CTTATATACT CGTCACTTCT ATCGTGTGTC 
GAAGGTTATA TACTTGTAGC ATTTGGGGAT GCAGTACGTA CGTGTGTCTG 
TAATAAGTTT CGTGATATGT TGCTTCATCC ATATGGACCA TATGTACCAC 
CAATCCCAGT GATATATAAT AATATAATAT CGTTGTCT

Gene models with high sequence identity

AT5G25610.1 [+] show detail - BURP domain-containing protein
E-value: 3e-49; Score: 193.00

InterPro Scan Digest

Program	Description	E-value
ProfileScan	BURP	95.684
HMMPfam	BURP	1.5e-86

See the detailed result >

AT5G25610.1

Model type: Protein coding
Short Description: BURP domain-containing protein
Curator Summary: responsive to dehydration 22 (RD22) mediated by ABA
Computational Description: RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR