K17428

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17428

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17428

Determination of introduced cDNA(s)

J033150L03 - Rice Full-length cDNAs - Original: J033150L03

full reading [+] show sequence

GACGGGAGAG GGAAGAGACA GAAACCCCGA AACCCCCCAA AGGTTCCCAC 
TTCCTCCCAC CCGCCCAAAC CCATCCTCCG CCGCCAACGC GCCGAGAGCA 
AAAAAAGAGA AGCACCGGGA TGCTGTACAT CGTGGGGCTC GGCCTCGGCG 
ACGAGCGCGA CATCACCGTG CGGGGGCTCG ACGCCGTCCG CCGCTGCGCC 
AAGGTCTACA TGGAGGCCTA CACCTCCCTC CTTTCCCTCG GCCTCGACCC 
CTCCGCGCTC TCCAACCTCG AGAAGATGTA TGGGAAGGAG ATCACGGTGG 
CGGACCGCGA GATGGTGGAG GAGCGCGCCG ACCAGATGCT CCGCGAGGCC 
GCCGACGCGG ACGTCGCCTT CCTCGTCGTC GGCGACCCCT TCGGCGCAAC 
TACACACACT GATCTGGTGG TTCGCGCCAA GAACATGGGG GTGGAAGTGA 
AGGTGATCCA CAATGCGTCC GTCATGAATG CAGTTGGAGT TTGCGGATTG 
CAACTTTACC GCTACGGGGA GACCATCTCT ATACCTTTCT TCACGGAGAC 
ATGGAGGCCG GACAGTTTCT ATGAGAAGAT TCAGAACAAT CGACGGCTTG 
GACTGCACAC ACTTTGCTTA CTAGATATTC GTGTTAAGGA ACCAACGCTT 
GAGTCTTTAT GCAGGGGAAA GAAAGTGTAT GAACCACCAA GGTTCATGTC 
TGTAAACACC GCAATAAGTC AGCTTTTGGA GGTGGAGGAA CTGCGTGGGG 
GATCTGCATA TGGCGCAGAT TCACTATGCA TAGGTGTTGC TCGCCTTGGA 
AGTGATGATC AGAAGATCGT CGCTGGACCT ATGAAGAAAC TACTAGATGT 
CGATTTCGGC CCACCCCTTC ACTGCCTTAT CATAGTGGGA GAGACGCATC 
CTGTGGAAGA AGAGATGATA GAATTCCACA TGATCAAGTC ATGATGAATG 
AAAGTGCTTT TATGGCCTTG TAGCTGGATA CATGATCCCA GGCTTATAGC 
TCCCTTGAAA CGATACTTCG ATGCTTCCGC CCGCCGTGAA AGGTCCACCA 
GTAGTAGTTT ACTGCTCCAA TTGTTGCTCA TTTTTAAGTT AAACTGGGAT 
CAGCTGTTGT TCTTTTTTTG GCCTGATACC GAATACTCTC AAACCAGTAT 
TGAACCTTGT TTACATTGTG TGAGCTCATA TTTGAATGTG TTCGTGC

Gene models with high sequence identity

AT4G31790.2 [+] show detail - Tetrapyrrole (Corrin/Porphyrin) Methylases
E-value: 2e-121; Score: 432.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	Tetrapyrrole methylase, subdomain 1	2.6e-41
Gene3D	Tetrapyrrole methylase, subdomain 2	3.1e-52
HMMTigr	Diphthine synthase	8.5e-100
HMMPfam	Tetrapyrrole methylase	2.8e-20
superfamily	Tetrapyrrole methylase	1.3e-52
HAMAP	Diphthine synthase	27.952
HMMPanther	Diphthine synthase	1.7e-141
HMMPIR	Diphthine synthase	2.2e-167

See the detailed result >

AT4G31790.2

Model type: Protein coding
Short Description: Tetrapyrrole (Corrin/Porphyrin) Methylases
Computational Description: Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity, diphthine synthase activity; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diphthine synthase (InterPro:IPR004551), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR