K17611

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17611

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17611

Determination of introduced cDNA(s)

  • J033126K03 - Rice Full-length cDNAs - Original: J033126K03

    full reading [+] show sequence

    Nucleotide sequence: J033126K03 - full reading 
    GATTTTCACA CGATTTTGCT ATCCCGCAGT CCGCGCGCGC ACCCGTTTCC 
    TCCAACGACT GATCTGCTGC GAGAAGCGTG GCCATGGCCA TGGTGGAGAA 
    GACGGTGCTG CTCTACCCTT GCCCTGCGGT GGGCCATCTC AACCCCATGG 
    TGCAGCTCGC CGAGGCCCTC GTCCGCCGCG GTGTCTCCGT CACCCTCGCC 
    GTCGCCGACC CGCCTGACAA GGGCGCTGTG CTGGCCGGCG CGATCGCCCG 
    CATCGCCGCC GTGTGCCCCT CCATCGGTGT CCGCCTCCTT CCCATCCCGT 
    CCTGCGAGGG CAAGACGTAC TCCCACCCCG TCATGTGGAT CGTCGACGCG 
    CTCCGCCTCG CCAACCCCGT GCTCCGGGAG CTCCTGCGCT CGTTCCCTGC 
    TGCCGTCGAC GCTCTCGTGG TCGACATGTT CTGCATCGAC GCGCTCGACG 
    TCGCCGCCGA GCTCGCCGTC CCGGCCTACA TGTTCTACCC GTCTGCGGCC 
    AGCGACCTAG CGATCTACCT CCAGGTTCCG CATGTCGCCC GCTCGGCTCC 
    ATCCTCTTTC AAGGACATGG CCGACACGGT GCTGAGCTTC TCCGGCGTGC 
    CGACGATTCG CGCGCTGGAC ATGCCGGACA CCATGCAAGA CAGGGAGAGC 
    GACGTGGGCA CGACCCGGAT TCACCACTGC TCCCGGATGG CTGAAGCGAG 
    AGGCATTCTG GTGAACAGCT TCGATTGGTT GGAGACGAGG GCCCTGAAAG 
    CGATCCGCGG CGGCCTCTGC CTGCCGTCCG GCCGCTCGGT GCCCGCGATC 
    TACTGCGTTG GGCCGCTGGT CGATGGGGGC AAGCTCAAGG AGAACGACGC 
    GCGGCACGAG TGCCTCGAGT GGCTGGACCG CCAACCGAAG CAGAGCGTGG 
    TGTTCCTCTG CTTCGGGAGC AGGGGCACTT TCTCGGTGTC GCAGCTGAGC 
    GAGATGGCTC GGGGGATAGA GAACTCCGGA CACAGATTCC TGTGGGCTGT 
    GCGTAGCAAC CTCGGCGAGG TGGACTTGGA GGCGTTGTTT CCGGAAGGGT 
    TCTTGGAGAG GACCCAAGGC AGGGGATTCG TCGTGAAGAA CTGGGCGCCG 
    CAGTCGGCGG TGCTGCAGCA CGGCGCCGTC GGCGCGTTCG TGACGCACTG 
    CGGGTGGAAC TCGTCGCTGG AGGCGATCAT GTCCGGCGTG CCGATGATCT 
    GCTGGCCGCT GTACGCGGAG CAGAGGCTGA ACAAAGCGCA CCTGGTGGAG 
    GAGATGAAGC TTGGGGTGTT GGTGGAGGGC TACGACGGCG AGCTTGTTAA 
    GGCCGACGAG CTGGAGACCA AGGTTCGGCT GGTGATGGAG TCGGAGGAAG 
    GGAAGAGGCT TAGGGAGAGG TCGGCGATGG CCAAGGAGAT GGCTGCTGAT 
    GCCGTCAAAG ATGGGGGTTC GTCTGACATG GCGTTCGCCG AATTCCTGAA 
    CAATTTGGGG ACGAACAACG TGAAAAGCGG CCCGAGAGAT ACACCCGTGC 
    ATGACTGAAA CACTGTAGCC GAGTTGGTTT TAGCAGGACC GAGAATAATG 
    TTCTTCAGTA TATTTAGATT TCGTCAGATT TTAGAGTTGT TCATGTCGTG 
    ATGTGGCCGA ATCTGTATGA GACTACGGTG CAACTATGCT AGCGCATCTC 
    ATGCAAAGTC CGGGCATCCT TACAGAGAAC ACACTAATTT ATTTCCCAGT 
    TTTTTCTC

    Gene models with high sequence identity

    1. AT3G16520.3 [+] show detail - UDP-glucosyl transferase 88A1
      E-value: 2e-83; Score: 306.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 1.3e-27
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 8.1e-63
    Gene3D no description 6.4e-18
    HMMPanther UDP-GLUCOSYLTRANSFERASE 1.9e-106
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 1.9e-106

    See the detailed result >

    AT3G16520.3

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 88A1
    Computational Description
    UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR