K17742

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17742

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • low brightness (PATO:0000327)
    (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17742

Determination of introduced cDNA(s)

  • J023008D01 - Rice Full-length cDNAs - Original: J023008D01

    full reading [+] show sequence

    Nucleotide sequence: J023008D01 - full reading
    GTCCCTGTTC GATCAGACGA TCACTGAACC ATTCCCCGGA GAAGAGGGAG 
    ATAGAAGCAA ATAAGCTCTT CATTTCCCTC TCAAGAGCAG CTCATCGAAG
    CTGTCAGATT TGGCCATTAT CGGTGCAAAT TCAGAGATGG TTAAGATCAA
    GGAATTCCGG ATCGTCGTGC CTATGTCGAT GGAAGAGTAT GAAATAGGGA
    TCAGCTACAC CATCATGAAG ATGGAGCAGC AAAACACGAA CAGCAAGGAG
    GGCGTCGAGG TGCTGCAACA GGTCCCATTG AGGATGAGAA GCTTGGCAAG
    GGCCAATACA CCTCGAAGAA TTATCATTTG CAGAGCAAAA TTCCATCTTG
    GATGAAAGGT TTTGCGCCAG CAAGTGCACT TACCGTGCAT GAGGAATCAT
    GGTGCGCATA TCCAAACAGC AGGACAGTGA TCAAGTGCGC GCTTTTTAGC
    AAGTGTTCAC TGACCATCGA CACTGTGATC AGACCTGACA ATGGCTGCTC
    TGAGAACGCC CACAATTTAA CCAGTGAACA ATTAGCTGCA AGAGAGGTAG
    AGGTCGTCGA CATCGCGTTG CAGTCGAGGG ACTACTGGAG CAAGGTGATC
    AGCGCCCCAA ACGTCGACCT GACAGCCTTC AGGTCGCAGA GGACGAGCCG
    AGGCCCTCTC TTGAAGGGTT GGATGGATTC ATGCCGTCCC GTCATGACCA
    CGTACAAGCT GGTGATCATG GACGCTCCGA TCTGGGGCTT GGGTGAACGC
    CTGGAAGACT GCATCATCGC GGGGGAGAGG GCGCTGTTCT TGGCGTGCCA
    CCGGCTGTGC TTCGCGTGGA TCGACGAGTG GTACGGCATG ACGTTGGATC
    AGATCCGAGA GATGGAGCGT CAGACCGACC TGCTTCTCAA GAAGACGCTG
    AAGAAGCCTG CGAAGGCCGG GAGCAAGCAC GATGGCAAGA GGAAGACGCT
    CAAAGAGGAG ATTGTAGCTG TCGGGAGCTG CACGTAGTAA ATTGGATTCT
    ACGCGAGATG TGGTTCGCTA CACTGGATGG CTCCAAGCTG TCACTCTGTC
    AGATTAGGCA TGCGTTGAGA TCTGGCAAAA ATTAAGCACT GTACAAAGGA
    ATCCACGGAT GATGATGTGT ATATGTTGGC ATCC

    Gene models with high sequence identity

    Not founds.

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther Phosphatidylinositol transfer protein 2e-67
    HMMPanther PHOSPHATIDYLINOSITOL TRANSFER PROTEIN 0.0006
    HMMPanther Phosphatidylinositol transfer protein 0.0006
    superfamily Bet v1-like 6.2e-58
    superfamily Bet v1-like 0.000000000022
    HMMPfam Phosphatidylinositol transfer protein 2.9e-54
    HMMPfam Phosphatidylinositol transfer protein 0.0000000055
    FPrintScan Phosphatidylinositol transfer protein 0.0000000000033
    FPrintScan Phosphatidylinositol transfer protein 0.0000000000033
    FPrintScan Phosphatidylinositol transfer protein 0.0000000000033
    FPrintScan Phosphatidylinositol transfer protein 0.0000000000033
    Gene3D no description 3e-57
    Gene3D no description 0.0000000026

    See the detailed result >