K17742

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17742

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • low brightness (PATO:0000327)
    (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17742

Determination of introduced cDNA(s)

  • J023008D01 - Rice Full-length cDNAs - Original: J023008D01

    full reading [+] show sequence

    Nucleotide sequence: J023008D01 - full reading 
    GTCCCTGTTC GATCAGACGA TCACTGAACC ATTCCCCGGA GAAGAGGGAG 
    ATAGAAGCAA ATAAGCTCTT CATTTCCCTC TCAAGAGCAG CTCATCGAAG 
    CTGTCAGATT TGGCCATTAT CGGTGCAAAT TCAGAGATGG TTAAGATCAA 
    GGAATTCCGG ATCGTCGTGC CTATGTCGAT GGAAGAGTAT GAAATAGGGA 
    TCAGCTACAC CATCATGAAG ATGGAGCAGC AAAACACGAA CAGCAAGGAG 
    GGCGTCGAGG TGCTGCAACA GGTCCCATTG AGGATGAGAA GCTTGGCAAG 
    GGCCAATACA CCTCGAAGAA TTATCATTTG CAGAGCAAAA TTCCATCTTG 
    GATGAAAGGT TTTGCGCCAG CAAGTGCACT TACCGTGCAT GAGGAATCAT 
    GGTGCGCATA TCCAAACAGC AGGACAGTGA TCAAGTGCGC GCTTTTTAGC 
    AAGTGTTCAC TGACCATCGA CACTGTGATC AGACCTGACA ATGGCTGCTC 
    TGAGAACGCC CACAATTTAA CCAGTGAACA ATTAGCTGCA AGAGAGGTAG 
    AGGTCGTCGA CATCGCGTTG CAGTCGAGGG ACTACTGGAG CAAGGTGATC 
    AGCGCCCCAA ACGTCGACCT GACAGCCTTC AGGTCGCAGA GGACGAGCCG 
    AGGCCCTCTC TTGAAGGGTT GGATGGATTC ATGCCGTCCC GTCATGACCA 
    CGTACAAGCT GGTGATCATG GACGCTCCGA TCTGGGGCTT GGGTGAACGC 
    CTGGAAGACT GCATCATCGC GGGGGAGAGG GCGCTGTTCT TGGCGTGCCA 
    CCGGCTGTGC TTCGCGTGGA TCGACGAGTG GTACGGCATG ACGTTGGATC 
    AGATCCGAGA GATGGAGCGT CAGACCGACC TGCTTCTCAA GAAGACGCTG 
    AAGAAGCCTG CGAAGGCCGG GAGCAAGCAC GATGGCAAGA GGAAGACGCT 
    CAAAGAGGAG ATTGTAGCTG TCGGGAGCTG CACGTAGTAA ATTGGATTCT 
    ACGCGAGATG TGGTTCGCTA CACTGGATGG CTCCAAGCTG TCACTCTGTC 
    AGATTAGGCA TGCGTTGAGA TCTGGCAAAA ATTAAGCACT GTACAAAGGA 
    ATCCACGGAT GATGATGTGT ATATGTTGGC ATCC

    Gene models with high sequence identity

    Not founds.

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther Phosphatidylinositol transfer protein 2e-67
    HMMPanther PHOSPHATIDYLINOSITOL TRANSFER PROTEIN 0.0006
    HMMPanther Phosphatidylinositol transfer protein 0.0006
    superfamily Bet v1-like 6.2e-58
    superfamily Bet v1-like 2.2e-11
    HMMPfam Phosphatidylinositol transfer protein 2.9e-54
    HMMPfam Phosphatidylinositol transfer protein 5.5e-09
    FPrintScan Phosphatidylinositol transfer protein 3.3e-12
    FPrintScan Phosphatidylinositol transfer protein 3.3e-12
    FPrintScan Phosphatidylinositol transfer protein 3.3e-12
    FPrintScan Phosphatidylinositol transfer protein 3.3e-12
    Gene3D no description 3e-57
    Gene3D no description 2.6e-09

    See the detailed result >