K17847

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17847

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17847

Determination of introduced cDNA(s)

  • J033073L22 - Rice Full-length cDNAs - Original: J033073L22

    full reading [+] show sequence

    Nucleotide sequence: J033073L22 - full reading 
    GTGTGTCTGC CTCTCTCTCT CGCGCGCGCA GCCTACCGCC ACAAGCAAAG 
    TCCAGGAGGG CTCGGGCACG GAAGCTTCTG GAAGCTTCCG CGTTGGCGTG 
    AGGAAGGAGG CGGAGGGGAG GGGAGGGGGA CTGACCTACT CCCTCACCGC 
    GGTCGTTCCA AGTCCCGCGC CGCCGGGGAT TCCCATCCCC TCTCGCGGCG 
    CGCCGCTTCG ACGGGAGGCA TCGTCGTATC GCATCGATCT GGTTTGGGGG 
    GTTTTGGGAG TCTGAAGTGG TGGGTTTGAG ATGGAGGACT TGCTGGACAC 
    GGAGATCGGG AAGCATGACT ACGACTGGCT TCTGACTCCC CCAGGATCAC 
    CTCATGCTCC TATACTGGAG GTTGTGGAGA AAGCTCCATC CTCAGATGTC 
    CCTAAACGCA TTACTACTAG ATCATCCTCA ACCACTAGAG CATCAAGGCT 
    TTCCATTCCT GAAACAGAGA ATGGGCATTC CACAGTACCA ACTAGGCCAG 
    CACGGAGTAA CTCTGTCTCT CGCCCTTCAA TCCAATCTAC TCTTATTTCC 
    AGCAACAACA GGTCATCAGT TGTCAATGCA AGCATTTCCT CTGTCTGTTC 
    GCCACCTACA ACTCCAAGCA AGAGGACTAG CACTCTTTCT TCATCAAAGC 
    CATCAGTTCC AGCTTCACGT CAAGTACCAA CACGGCCCTC TACTCCAACT 
    AAAACCCGTC CATGTACTCC AGTGAAACCT CGGCCATCTA CTCCAGTCAA 
    ACCTCGGCCA TCTACTCCAA ATAAAACTCG ACCTTCTACT CCAGTCAAAA 
    CTAGATCTTC TGTACCGAAC ACTATGTCCA CCTCAACTAT TGCCAAAACA 
    ACATCTGCAC AAAACTCGAG ACCATCAACT CCAACCTCTC GGCCTCGTAT 
    CATGTCCAAT TCATCTTCAA GTACAAGTTC TGCAGCAAGT CGTCCTAGTT 
    CATCCTCTGG AAGAACTAGT ACAATTAGTC GCACCTCCTC TTCCACAAGT 
    ACAGTTCCTT CAGTCAGCCG CTCTAGCTCT CGTTCATCTA CACCTACGCG 
    TCAGCCTATC ACACGTTCAT CAGCCCCACT GGCTGGCTAC TCACCTTCTG 
    TTGGGAGGAT ATTTGGCAGC AATAACATAA CATCCATCGG GCGGCCTGTA 
    ACCAGTAATG GTCGAAGTTC AGCACCTTCT TCTGCACCAT CATCTCGTCC 
    AAGTTCCCCA AATTCACGTG CACGAGCTCC AGTCAGGCCG TTAGATATTC 
    CTGATTTTCC AAGTGAAACT CCACCAAACC TAAGGACTAA GCTACCACAA 
    CGACCACTAT CTGCTGGTAG AGCACGCCCA GGAGTGGGTT TGGGACCCAA 
    GTCAGCCCCA AATGCTGAAC AAGTTCGCTC AGCTCCTGTA AAAAAGATGA 
    CTGTGCCTGC TATTACGCGA AGTAAATTTC CTGATGCACC ATCTAGGGTA 
    TCTTCTCTTA CAAATGGACA CCAAAGCAGA CAGTCCGAGG GGTCTGCTGT 
    GGAAGGCCAA CATACTAAAC CATTACGGTC TATCACGGGC ACAGATAATG 
    GCTTTGGTAG GACAATATCA AGGAAGTCAC TTGACATGGC AATCAAGCAT 
    ATGGACATTC GACAAAACCT GGGTGGTATT CGTGGTGCAT CTCTATTCCC 
    GCCTAGCATT CGCTCTGCCG GTGCGAAGGT CCGGTCAGCT CGAATGTCTG 
    ATCCCGCTCA TCTCAGTTTA AATGGCGATT GTCATTTTAC TGACAATGGC 
    AGCATCAATG GACACTTCTC TGGAGATTCG AACGGAACTC TTTCAAACAA 
    CGGTGGCAGC TCAACTGGTT CTCCAGACAG GGAAAGCATT GGAACTAAGG 
    AGACACTGTG TGAACTAGAT CTGTATACCA CTGCACGGTA TGAGGCATTG 
    TTGTTGAGGG AGGACATAAC GAACACGAAC TGGTTGCACA ACGTTGATGA 
    CAAATCTGAC CAGAGCCCAG TGTTTGATCA CCGGTTTGAG CCGCTCCCAG 
    AGCCATTTGG TCCACTATGA TGGTTATTAG CTGTAAAATC TCGTTCCTCG 
    TTATGTTTAC AATTAGTAGT TGCAAGTTGT ATGCGGTTAT ATCTTTCTGT 
    GTGGTTGTCC ATTTCCCCCA TCTTTTCATG AATCTTCTGA AAGATAAGAT 
    TGTGGGGTTT ATGTTTTGAA GTAGTACTCC ATAAATACCT GGAGATTCGA 
    TTTTGAGTTA TCGCTGTACT GAAATCCAAG TGTCAGAGCA CGATATAGTT 
    TCTCTTTTTA TCCC

    Gene models with high sequence identity

    1. AT3G08670.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51540.1); ...
      E-value: 4e-32; Score: 137.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G08670.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast hits to 29827 proteins in 1356 species: Archae - 46; Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants - 2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR