K18128

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18128

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18128

Determination of introduced cDNA(s)

  • J033089E10 - Rice Full-length cDNAs - Original: J033089E10

    full reading [+] show sequence

    Nucleotide sequence: J033089E10 - full reading 
    GGTGGTAACA TTCGGTGTGG TAGTGGGCAT ACTCGTCCTC CTCTTCGTGC 
    TCGTCCTCGT CGTCACCATC GAGGGCGTCT GCAAGCGCCG CTCCTCCTCC 
    TGATTCCGCC GCGGTCGCTA GCCCTAATGC GCGGGGGCCT CCTCGTCCTG 
    CTCCTCCTCA CCGCGGCCGT CGCCGGCGGC GGCGGCCACG AGGGCTCCTC 
    CTCCTGCCCC TTCCACGCCC ACGACAAGCC CCACGATGAT CACCACCACG 
    GCCACGGCCA CGGCCACGGC CACAGCTGCG GCGGCGGCGG GGACGACTCC 
    CACCACGTGC ACCATCATCA CCATGGGCAT GGGCATGGCC ATGACGGCGG 
    GATCCAGCGG CGGCTTCTCC CCGAGGAGCT CGCGGAGGAG GCGGATCTCG 
    AGCTCGACTC CTTCGGCGAT CACCACCACC ACCACCACCA TCACCATGAA 
    CACCACCACC ACGACCACCA CCATGGCCAC GGCGACTTCC AGGCCGAGTT 
    ATCACCCTTG GGTATGTGGC TGAGTGCCAT GGGATGCTCG CTTCTGGTCA 
    GCATGGCGTC GCTCGTCTGC CTCGTCCTGC TCCCAGTAAT CTTCTTCCAG 
    GGGAAGCCGT CCAAGACCAT GGTGGATTGC CTTGCCATCT TCGGGGCAGG 
    TGCGATGCTT GGGGATTCAT TTCTTCATCA ACTGCCACAT GCCTTTGGTG 
    GAGGGCATTC TCATACACAT GATCATCAGA ATCATAATCA TTCTCATGAG 
    CATTCACATG CACACTCTCT GGAAGATCTT TCTATTGGTT TGTCTGTTCT 
    ATTTGGCATT GTGTTTTTCT TTATTGTTGA GAAGATTGTG AGGTATGTGG 
    AAGACAATTC TCAGAAAGGG GCTCATGGCT TGGGCCACCA TCATCACCAT 
    CATAAACGAC ACGATAGGAG CGACAAGGCC AAGTTGAATC ACGCAGAAAA 
    GGATCATGAG GATAAAGGCG TAAATCAAGC AGAAAAGGAA CCTTCGCATG 
    ATGGTGCAAT TGAGAAAACA GATGGTGTAA CTCGTGCTGA TTCAAAATCT 
    GCAATCCGTA AGAGGGGCTT ATCTTCTGGT TCCAATTCCG CTGATAGAGA 
    GCCTGTCAAT TCTGAAAGTG ACCCTGCCCC TAACAAAGCA TTATCAAGTG 
    AAGATTCCTC TGTTTCCAAT TCGAATATGG TGTTCGGCTA CCTCAACCTT 
    TTCTCAGATG GTGTTCATAA CTTTACTGAT GGGATGGCCC TAGGGAGTGC 
    TTTTCTGCTA CATGGTTCTG TTGGAGGATG GTCGAGAACT CTATTTCTGC 
    TTGCACATGA ACTTCCTCAA GAGGTCGGAG ATTTTGGTAT CCTGGTGCGC 
    TCAGGATTCA CTGTAACTAA AGCCCTATTT TTCAATTTTC TCTCTGCGTT 
    GGTTGCTCTT GCTGGAACAG CACTGGCATT GTCTTTGGGA AAAGATCCAG 
    GGCATTCTTC TTTGATTGAG GGATTCACTG CTGGTGGCTT TATTTATATT 
    GCTGTTGCTG GAGTCCTCCC AGAGATGAAT GATCAGAAAA CAACCGTCAA 
    AAGCTCGATG ATTCAGTTGG TTTCCCTGAC AATGGGAATG CTGGTTGCCC 
    TCGGCATATC TCTAGTAGAA TGATGACGGA ATTTCTGGTT GCAGCTTTAG 
    GGCCTATTGT ACTTAAGCCA AGCGGGGAAG ATGATTATAT CTTCGGTTTC 
    TGCTCCACGG ATGCACTCAG CCACAGAGTA AGGTAAGGCA TTCGAGACAA 
    TGTTTAATCA GGTAGCTCGG CACAGTGGCA CCATCTCTAA AGATTTCATT 
    GTTCTCCAAG TTCGAATGAT GGCAAGAATA ACAAGCATCA CTACTCACTA 
    GTAGATATGA GTACCTCTTA CAATAAAACA CATCCCTGTT GGCATCAACG 
    GTAGATGTGA GTATGTGACC CATGACAGAA TTAGTGGTAA GCACTGAATG 
    GAACCATGGA AGTGCTGCGT TC

    Gene models with high sequence identity

    1. AT1G68100.1 [+] show detail - ZIP metal ion transporter family
      E-value: 2e-93; Score: 340.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther IAA-ALANINE RESISTANCE PROTEIN 1 1.1e-150
    HMMPanther ZINC TRANSPORTER SLC39A7 (HISTIDINE-RICH MEMB 1.1e-150
    HMMPfam Zinc/iron permease 6.1e-58

    See the detailed result >

    AT1G68100.1

    Model type
    Protein coding
    Short Description
    ZIP metal ion transporter family
    Curator Summary
    member of IAA-alanine resistance protein 1
    Computational Description
    IAA-ALANINE RESISTANT 1 (IAR1); FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); Has 3060 Blast hits to 2483 proteins in 472 species: Archae - 4; Bacteria - 929; Metazoa - 1358; Fungi - 209; Plants - 119; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR