K18225

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18225

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18225

Determination of introduced cDNA(s)

J033041C01 - Rice Full-length cDNAs - Original: J033041C01

full reading [+] show sequence

GGGGGTTGGT GAGTTGGTCT GTTGGTGGCC GGGGCGCGGG CGCGCTTACC 
TGTTCTCCCT CGCGTGGAGC TCTTTGACTA CGCCCGCCAG CTGCGCGTGT 
GTATAACCTT GCTTGCTTGC CTCTCACAGC CGAAGTCGCA GGCGCAGTCA 
GGAGCTATCG GGAAAACGGG ATTTCCCCCA GCTTTCCAAG GTTCGCGGGT 
CAATCTCGCA GTGATACTCC GGCGGCGGCA ATGGACGCCG GCGAAATCAT 
CGTGGCCCAG CCATCGCCGC GGCTGTATAA GAGTTTGACT TTCCGGAGGA 
TCGCGACGAA GGAAAGGACC ATTCCCCAGG ATGAAGAGAT GAAGATTCGC 
AGCCCGAGGT TCCAGGACGA AAGCCTCACT GCGCCATTTA TACTAGACAA 
GAAAGCGAGG AGCAAAGCGC CAACAGTGGT CCTAGGATTC GAGTGCTTGG 
AGAGCACAGC ATTTAACGGC ATTGCCACGA ACCTGGTGGT GTACCTGGAG 
ACTCTCCTGC ACGGCAGCAA TCTCGCGAGC GCGTCCAATG TCACGACGTG 
GTTCGGGACG AGCTACCTCA CCCCGGTGTT CGGCGCCATC ATCGCCGACA 
CGTTCTGGGG CAACTACAAC ACCATCCTCG TCTCCCTCGT CTTCTATCTC 
CTTGGTATGA TGCTGGTCAC CTTCTCGGCG TTCCTGCCGA CCACCGCGCT 
GTGCACCGTG GTGGGCTCGT CGTGCCAGCA GCCACTTCTT GGCGCGCAGA 
CCATCGCCTT CCTCGGGCTC TACCTCGTGG CGTTCGGAAG CGGCGGTGTG 
CGCGCGGCGC TGCTGCCGTT CGGCGCGGAC CAGTTCGACG ATGACAACAC 
GGCCGACCGC GAGCGCAAGA TGTCCTTCTT CAGCTGGTTC TACATCTGCG 
TCGACTTCGG GATGATCGTG TCGGGCCTTT TCATCGTGTG GATCCAGCAG 
AACGTTAGCT GGGGACTTGG CTTCGGCATC GCCACGGCCT GCATCGCGCT 
CGCCTTCGGC GGCCTCGTGC TCGCCACGCC CATGTACAAG CGCCGCATGC 
CCACAGGCAC GCCGATCAAG AGCCTCGCGC AGGTCGTGGT TGCCGCGTGC 
CGGAAGGCAA GACTCCGTGT CCCCGCGGAC ACTACTCTTC TCTACGAAGT 
CCATGACAAG ATCAACCAGT CGAAGATAGC GCACACCGAC CAGTTCGGCT 
TTCTTGACAA GGCCGCGGTG GTCATGGAGT CCGACTTGGA AGAGGAATCG 
AACGACGTCG CGGCGGATGC CTCGTGGAGG ATCTGCACGG TGACGCAGGT 
CGAGGAGCTC AAGATCCTGC TGCGGCTATT GCCGATATGG GCGACGAGTA 
TCGTGCTTTC GGCGGCGTAC GCGCAGCTGA ACACGACGTT CGTGCAGCAG 
GGCGCCGCGA TGAACATGCG GATCATGTCG TTCACCATCC CGCCCGCGTC 
GATGGTGTCC TTCGAGGTGC TCTGCGTCCT GGCATGGGTT CTCATGTACA 
GCTCCGTGAT CGTGCCCATG CTCAACAGCT TATCCCTGGC CAACGGCGAG 
CCGTCGCAGC TGCAGCGGAT GGGCGCGGGG CGGCTGCTCA TGGCGTTCGC 
GATGGCCGTC GCGGCGCTGG TGGAGATGAT GCGGCTGGAC GCGGCGGGGC 
GCGGCGAGTC CCTGAGCATC GCGTGGCAGA TGCCGCAGTA CTTCGCGCTG 
GCCGGCGCGG AGGTGTTCTG CTACATCGCG CAGCTGGAGT TCTTCTACAG 
CGAGGCGCCG GAGTCCATGA AGAGCATGTG CACGTCCCTG GCGCTGCTCA 
CCGTGGCGCT GGGAAGCTAC ATGAGCTCAT TCATCTACGC CGTCGTGAAC 
GCGTTCACCG CCGTGGACGG GCGGCCCGGG TGGATATCGG ACAACCTCAA 
CGAAGGACAC ATGGACTACT TCTTCTGGGT CATGGCGGCG CTGTGCACGC 
TCAACTTCGT CGTGTACAGC GCGTTCGCCC GGACCTACAG GGTGAAGCTG 
GTCGTGTCGT GATTGTTCGT TACTCCCTTA CCATGATCAG GTTACACGCA 
ATCGTGGTCG TATTGTGTTA CAGAAGAATC TTGTACTCCT AGCTAGCAAT 
AGCGACAGCC GACAGTATGT GTAAAGTTCA AGGAAAAAAA ACAAGGTTTG 
ATGGGCTGAC AGCCCAGCAG CTTCCTTT

Gene models with high sequence identity

AT2G02040.1 [+] show detail - peptide transporter 2
E-value: 6e-140; Score: 495.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Major facilitator superfamily, general substrate transporter	0.000000000000014
HMMPanther	OLIGOPEPTIDE TRANSPORTER-RELATED	1e-275
HMMPanther	OLIGOPEPTIDE TRANSPORTER-RELATED	1e-275
HMMPfam	Oligopeptide transporter	6.3e-75

See the detailed result >

AT2G02040.1

Model type: Protein coding
Short Description: peptide transporter 2
Curator Summary: Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.
Computational Description: peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink).
Link: InterPro Scan - TAIR