K18246

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased size (PATO:0000587) (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18246

Determination of introduced cDNA(s)

J033119O19 - Rice Full-length cDNAs - Original: J033119O19

full reading [+] show sequence

GATTGGCAGT TTGGCACTCG AATCTCCGCC ACACCACATC CCGGCCGCGC 
CCCCGGCCTC GCGGGCGTGT CACCCGGAGA CTGAGCGCGC GGCGCCGCGT 
TGGAGTCACG CCACGCCATG GAGAGAACCG TGGTGCTGTA TCCCGGCCTC 
GGCGTCGGCC ACCTGGTGCC GATGGTTGAG CTGGCCAAGG TGTTCCTCCG 
CCACGGCCTC GCGGTCACCG TGGCAGCCGT CAAGCCGCCA CTCGACTCTC 
CCGATTTCTC CGCCGCTGTC GCGCGCTTCG CGGAGTGCAA CCCCGCCATC 
AACTTCCACG TGCTGCCGCC GCCGCCGCCA CCGCCCGCGC CCGTGGGCTC 
CGGCTCCGAC GGCAAGTCCG CGTCCCCGAT CGTCGGTATG CTCGGGTTCC 
TCAACGCCAT GAACGCGCCG CTCCGCGACT TCCTCTGCTC GCTGCCCTCC 
GTGGACGCGC TCATCGTCGA CATGTTCTGC ACGGACGCTC TCGACGTCGC 
CTCCGAGCTC AGGTTACCGG TCTACGTTTT CTTCACCTCG GCCGCCAGCG 
ACCTCGCCGT CTTCCTCCAC CTAACCAGCA TGCGAGATAG CATCAACACA 
AGCTTCGGGG AGCTCGGTGA CTCCATGATC CACATCCCGG GCTGTCCTCC 
GTTCAAAGCT TCAGAGTTAC CATCAGATAT TCTCAGTGAC AACGAAGCAT 
CCAGGCTTAT CTTACTGATG TTCCGTCGGC ATCCAGAGTC GAGAGGAATT 
CTTGTCAATA CATTCGAGTC GCTGGAGACG CGCGCGTTGC GCGCTCTGGA 
GGACGGGCTC TGCGTCCCCG GCCGTGCCAC GCCGACGGTC TACTCCATCG 
GGCCAATCGT CTCGGGTGGC GGTGGCAGCG ACAAGGATCA CGACTGCCTC 
CGGTGGCTGG ACGCGCAGCC GGACAACAGC GTGGTGTTCC TCTCGTTCGG 
GAGCTTGGGA AGGTTCTGCA AGAAGCAGCT CGAGGAGATC GCCATTGGCC 
TGCAGAAGTC GGAGAAGAGG TTCCTCTGGG TCGTGCGGAG CCCGCGCATC 
GACGAAAAGA ACGTGTTCGA GCCGCTGGCG GAGCCAGACC TCGACGCGCT 
CCTGCCGGCC GGGTTCATGG AGGCGACAAG GGGGAGAGGG CTCGTGGTGA 
AGCTATGGGC GCCGCAGGTG GAGGTGCTCC GCCACAGGGC GACCGGCGCG 
TTCGTGACGC ATTGCGGGTG GAACTCGACG CTTGAGGGGA TCACGGCGGG 
GCTGCCGCTG CTGTGCTGGC CGCTGTACGC GGAGCAGAGG CTGAACAAGG 
TGTTCGTCGT GGAGGAGATG AAGCTTGGCG TGGAGATGAG GGGCTACGAC 
GAGGAGGTGG TGGTGGCGGA GGAGGTGGAG GCGAAGGTCA GGTGGGTGAT 
GGAGTCCGAG GGCGGCCAGG CGCTCAGGCA GCGCGCGGCC GCGGTGAAGG 
ATGCGGCGGC CCAGGCGATC AAGGAAGGGG GCTCGTCTCA TGCCGCGTTT 
TTCAAGTTCC TCGAGGACCT GCCGCTGCAG GTCTCCAGAG GCATGGTTAG 
TGCATGATTT CGAGCCATGG TAATTTGTCG GGCACTGTGT TTACCTGCGA 
CTGTGAGCAA CATAATTTGA GTACTGTATG GTTCTCTTAG GATTGGATAA 
TGGATGTTCT TTCTGATAAC ACGAGATATC GGTGGGCACT GAGCATGGTC 
ATCCATGTAA GAGTACACTG TTATCGGTGG ACATTCGGCA TAGTCATCCA 
TGTAAGTGTG TGTACTGTGT AGTGTCTATT GTTTACTCTC TCCATTTCAA 
AATATAAATA TTTTTAGCAT AGTGATAAGT T

Gene models with high sequence identity

AT3G16520.3 [+] show detail - UDP-glucosyl transferase 88A1
E-value: 2e-75; Score: 280.00

InterPro Scan Digest

Program	Description	E-value
PatternScan	UDP-glucuronosyl/UDP-glucosyltransferase	0
Gene3D	no description	2.1e-11
superfamily	UDP-Glycosyltransferase/glycogen phosphorylas	2.5e-46
HMMPanther	UDP-GLUCOSYLTRANSFERASE	2.8e-118
HMMPanther	UDP-glucuronosyl/UDP-glucosyltransferase	2.8e-118
HMMPfam	UDP-glucuronosyl/UDP-glucosyltransferase	4e-25

See the detailed result >

AT3G16520.3

Model type: Protein coding
Short Description: UDP-glucosyl transferase 88A1
Computational Description: UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
Link: InterPro Scan - TAIR