K18304

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow) low brightness (PATO:0000327) (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18304

Determination of introduced cDNA(s)

J013002L22 - Rice Full-length cDNAs - Original: J013002L22

full reading [+] show sequence

GGCTTTGGTT CCTTCTTCTT CCATTCCATT GTGTTGATGA GTTGAGTTGG 
CTCATCTCAT CGTCGCCGTC CTTGAATTGC CGCCTCCCAT CCCACGAATT 
CCGCCCCTCC CACCCTCCTG AGATCTCTCT CTCTCCCCCA CCTCCGTATT 
TAGGTAGGCG GCGGGCGCAT CACGTTCTAT TGCCCCCTCC TGCCCGCCGC 
CGCCGCCGCA CAGCCGGCGA TCGAGCGGAA TTCCCATTCC TTTCCGCCCG 
GTTTCCGGCG CTGCCGCCCC CCTCTTACCA TCCCGGGGGG GCCCAGAGGC 
CAGGAGCTGT CGCCGGAGGA TTTCAATTTT TCGGAGCCAT TTGATGCTAA 
TGCCACACCA CCACTCCTGC TAAAGCTGCC CTCATTATGA ACTCGCTGGA 
CAATGAGTAG CAATTGCACA TTGCTGATTT CCATCTCCTG CGGTTACATT 
CGTACACGAC AGCATGGGAA AACTTGCAGC TGTTGTTCGC AGTGTACTTA 
GATTAACAAA TGAAAGCATG AGGATTGTTA TGGTAACAAT TATTGGAGTG 
CTCTTGGGCT TCTTCATTGG AATTTCATTC CCATCAGTCA GCATAACAAA 
GCTTCACTTT CCTTCTAGCT TTGTATCATA CATAGAAGAC AGAAACTCTG 
GGCTCACTAC ACAAGCTTTG CTTAATCACG CCTGGACTTC CGCCCGAAAT 
GCAAGGGAAA ACAGTTCTGA ACCAAGTTCA AACACTACTT TGAAGATTTA 
TGTCCCAACG AACCCCAAGG GTGCAGAGAG ACTAGCACCA GCTATTGTTG 
TGCCAGAAAC TGACTTCCAT TTGCGCAGGT TATGGGGAGA ACCAAGTGAG 
GACCTGCCCT TCAAACCAAA GTACCTTGTT ACTTTCACTG TTGGATATGC 
ACAGAAAGAA AATATCAACA GAGCAGTGAA GAAGTTCTCT GACAATTTTG 
CTATTCTGTT GTTCCATTAT GATGGTCGGG TGAGTGAGTG GGACGAGTTT 
GAGTGGTCGA AACGAGCCAT CCATATAAGT GCCAGGAAAC AAACTAAGTG 
GTGGTATGCC AAAAGATTCC TGCATCCTGA TATTGTGGCA GCTTATGAGT 
ACATATTCAT CTGGGATGAG GACCTTGGGG TGGAGCATTT CAATGCGGAG 
GAATACATCA AACTTGTCAA GAAATACCAT CTGGAGATCT CTCAACCTGG 
TTTAGAGCCT GATCGGGGAT TGACATGGCA GGTGACAAAA AGAAGAGGTG 
ACCGCGAGGT CCACAAGGTT ACAGAGGAGA GGCCGGGCTG GTGTTCTGAC 
CCTCATCTTC CGCCTTGTGC TGCCTTTGTT GAAATAATGG CTCCAGTCTT 
CTCTAGAGAT GCATGGAGAT GTGTATGGCA TATGATTCAG AATGACTTGG 
TTCATGGATG GGGCCTTGAT TTTGCTCTCA GGAAATGCGT GGAGCCTGCT 
CACGAAAAGA TTGGGGTTGT TGATTCACAG TGGATTGTTC ACCAAGTGGT 
TCCATCTCTC GGGAACCAGG GCAAGTCAGA GAATGGAAGA CCAGCATGGG 
AAGGGGTGAG GGCGCGGTGC AGGAAGGAAT GGGGGATGTT TCAGACGAGA 
ATGGCGGAGG CGGAGAAGGC GTACTACAAG ATGATGGGCA TCACCCCTCC 
GAACTCCACA CTGGTGTAGA TCTAAGCTAG GCTGATTCTT CATCTTCATC 
TTCACTCCCA TCTCTGCCTC TGTCTGAATG ACGAGGATTC TGATGTGTTT 
TACCTGCTGT ACAGACAGTT CTGATGAACT GATGAGTGTG TAGGTAGGTG 
GTCAGATAGA GTGTGGATTG GATGGTGATG ATTGTAGAGC ATACATTTAC 
ACATGAGGGA GGGAGGGCCA TCGATCATGA GGAGGGTGTT ATACATACCA 
TCTATAAAAT CGATTATTTT GTGTTTTTGT GGTGGT

Gene models with high sequence identity

AT1G67850.2 [+] show detail - Protein of unknown function (DUF707)
E-value: 5e-159; Score: 558.00

InterPro Scan Digest

See the detailed result >

AT1G67850.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF707)
Computational Description: Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR