K18347

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18347

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18347

Determination of introduced cDNA(s)

  • J013059M20 - Rice Full-length cDNAs - Original: J013059M20

    full reading [+] show sequence

    Nucleotide sequence: J013059M20 - full reading 
    GATCAATCGT ATCGCTTGCC ATGGGCTCAA ACTCGCGCCT GCACGCCGTG 
    CTCATCCCGT ACCCGGCGCA GGGCCACGTC ACGCCCCTCC TGCACCTCGC 
    CAAGGTGCTC CACTCCAGGG GGTTCCACGT CACCTTCGTC AACTCCGAGT 
    ACAACCACCA CCGCCTCCTC CGTTCCCGCG GCACCGGCGC GCTGGCCGGC 
    CTCGACGACT TCCGGTTCGA GACCATCCCG GACGGCCTGC CGCCGCCGTC 
    CGAATCCGAC AACGACGACG TCACGCAGGA CATCCCCACG GTCTGCACGT 
    CCTTCCTCAC GCACGGCCCC GCGGCGTTCG GGGCCCTCCT GGCGCGGCTC 
    AACAGCGAGC CCGGGACGCC GCCGGTGAGC TGCGTTATAC CGGACGGCGT 
    GATGAGCTTC GCACAGAGAG TGGCCAGCGA CATGGGCATC CTTGCCCCGG 
    CGTTCTGGAC CACCAGCGCC TGCGGCTTCA TGGGATATCT CCACTACGCC 
    GAGCTCATCG ACAGAGGCTA CGTGCCACTC AAAGATGAGA GCTACCTGAC 
    CAACGGATAC CTCGACACCG TGCTCGACTG GGTGCCGGGG ATGCCAGGCA 
    TCCGGCTGCG CGACATGCCC AGCTTCATCC GCACGACCGA CCGGGACGAG 
    TTCATGCTCA ACTTCGACAG CGGCGAGGCG CAGAACGCGC GCCACGCGCA 
    GGGCCTCATC CTCAACACGT TCGACGCGGT GGAGCACGAC GTCGTCGACG 
    CGCTGCGCCG CATCTTCCCG CGCGTGTACA CAGTCGGCCC GCTCCTGACG 
    TTCGCGGGGG CCGCAGCGGC GCGGCGCCCC GAGGTGGGCG CGATCGGCGG 
    CAACCTCTGG AAGGAGGACG CGAGCTGCCT TCGGTGGCTG GACGCCCAGC 
    AGCCCGGCTC GGTCGTGTAC GTCAACTTCG GTAGCATCAC CGTCATGTCG 
    CCGGCTCATC TCGCCGAGTT CGCGTGGGGG TTGGCGCGCT GCGGCCGGCC 
    ATTCCTGTGG GTCATCAGGC CCGACCTCGT CGCCAGCGAG AAGGCCATGC 
    TGCCGGAAGA GTTCGTCAGC GAGACCAAAG AGAGAGGGAT CTTTCTGAGC 
    TGGTGCCCGC AAGAGCAAGT CCTGGAGCAT CCGGCGACCG GCCTGTTCTT 
    GACGCATTCC GGCTGGAACT CGACGCTGGA GAGCATAAGC GCCGGCGTGC 
    CGATGATCTG CTGGCCGTTC TTCGCCGAGC AGATGACCAA CTGCCGCTAC 
    GCTTGCACCA AGTGGGACAT TGGACTGGAA ATTGACACCG ACGTGAAGAG 
    GGAGGAGGTG GCACGGCTCG TGCAAGAGGC CATGGATGGA GAGAAAAGCA 
    AGGATATGAG AGCGAAAGCA ATGGCGTGGA AGGAGAAAGC CGTGGCGGCA 
    ACGGAGGAAG GAGGCACTTC GAGCGCCGGA ATAGATCGTT TGGTTGAATT 
    TCTGCTTGCA AGAGGTGATC ACGCAAGCTG AATATTGTTG TTGTTGATCA 
    ATCCTAAAAA TGCGATTTGT AATTGGGTAA ATGAATCTAT GATGTGACCA 
    TCTCCCACTA TCTTGTTAGA AATATCAAAT ATTAGTTCTG GAGTGG

    Gene models with high sequence identity

    1. AT1G22360.1 [+] show detail - UDP-glucosyl transferase 85A2
      E-value: 5e-157; Score: 551.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 9.4e-17
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 1.1e-53
    HMMPanther UDP-GLUCOSYLTRANSFERASE 3.5e-132
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 3.5e-132
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 3.7e-30

    See the detailed result >

    AT1G22360.1

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 85A2
    Computational Description
    UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7750 Blast hits to 7637 proteins in 383 species: Archae - 0; Bacteria - 124; Metazoa - 2215; Fungi - 30; Plants - 5218; Viruses - 99; Other Eukaryotes - 64 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR