K18535

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18535

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18535

Determination of introduced cDNA(s)

  • J033045K24 - Rice Full-length cDNAs - Original: J033045K24

    full reading [+] show sequence

    Nucleotide sequence: J033045K24 - full reading 
    GTTTCATCCA TCCAGCGGCA CACACACCAA GCTAGCTTCT AGTAGTTGAG 
    CAATGGCGGC GTCGTGCCAC GAGGTGGAGG TGCCGGGGAA GCCGACGGAG 
    ACGGGGACGG CGCTGCTGGA GGCGGCGACG GGGAGCATCC AGGGGTTCGG 
    CCCCGTGAAC CAGATCCACC AGCACCTGTG CGCGTTCCAC TTCTACGCCG 
    ACGACATGAC GCGGCAGGTG GAGGCGCACC ACTTCTGCGC CCACCTCAAC 
    GAGGACATGC GCCAGTGCCT CATCTTCGAC GGGCCCGACG CCGGCGCGCG 
    CCTCATCGGC GTCGAGTACA TCGTCGCCGA GCCGCTGTTC CTCACGCTCC 
    CCGACGACGA GAAGCCGCTG TGGCACACCC ACGAGTTCGA GGTCAAGGGC 
    GGCGTCCTCT TCATGCCCGG CGTCCCCGGC GTCGTCGAGC GCCGCGACCT 
    CGAGAGGGTG TGCAAGACCT ACGGCAAGAC CATCCACTTC TGGCAGGTCG 
    ACCGCGGCGA CGCGCTCCCG CTCGGCCTGC CCCAGATCAT GATGGCTCTC 
    ACCCGCGACG GCCAGCTCCG CCAAGAACTC GCCAAATGTA CGTGCAAAAT 
    CATTCATGTT CAATTGTGTT TTTTTCTCCA ATCTATCGTC AGTCGTCACA 
    GCTTAACTAC TTGTGTTGGT GATTGGTGCG TGCATTGCAG GTGTGGAGGA 
    GAAGTTCAGC GTGTCGTTCG ACAAGGAGAG GGAGAACCGA GCGTACATGA 
    GCGGCCCGGA TCACGGCATC CACCCGCTGG CGAATGCCGC CGGCAAGGGC 
    TTGAAGACCG ATCTCCGGGA GGTTGATCTG CCGGCGATGA CTACGGCGCA 
    CGCCGGGAGG GTTTTCACCT GATGACGACA CACTGATGAG CGATTGAGCG 
    ACGACTCGAC GGCCTTGCTG CTTCTGCCTG ACGACGGTTA AGTAGTATGC 
    TAGCATATCA CGGGATGCTC CGATTAGCTT GTGTACCTTC ACTCGTGTTA 
    TGTATCGATC TGTTGTCCCT GAGCGTTTGT TCTGAAAGAA GCACACTAGA 
    GTATCCGACT GTAGTACCTG TAGCCTCTTT CCTAGCAGCT TGATGAACAC 
    AAGAACAACA GAACAGGTTG TGT

    Gene models with high sequence identity

    1. AT2G31985.1 [+] show detail - Protein of unknown function (DUF1264)
      E-value: 2e-82; Score: 67.40

     

    InterPro Scan Digest

    See the detailed result >

    AT2G31985.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF1264)
    Computational Description
    Protein of unknown function (DUF1264); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT1G05510.1); Has 289 Blast hits to 289 proteins in 122 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 64; Plants - 102; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR