K18548

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18548

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18548

Determination of introduced cDNA(s)

  • J023045I10 - Rice Full-length cDNAs - Original: J023045I10

    full reading [+] show sequence

    Nucleotide sequence: J023045I10 - full reading 
    GGCTAAATGC TAATCCATCA TCATTTTATG CGCTAATCCA CTCCAGATCA 
    CGCCGCTAAT CGTTATCCAA ACGAATTAAC AACAAATCAG TCGCGCGTTT 
    GAAACGAGTC CACTCCACCT CCATCCAGAT CAGTGTATAT AAACCGCCGC 
    GCCGTTTGTT CGTGCTGATT CTCTCTCTCT CTCTAATCAG TAGTACCCCA 
    GATCAGTTTG TTGCTTTGCT GCTTCTTCCG GTTCCAATCT GAGAGGGGGG 
    ATTCGCGCGG GAGGCGAGGC GAGGCGGCAG CCATGGTGGG GCGGAGCTCC 
    CTCCCGGAGG GTTCCCTCTT CCTCGGATTC GACAGCTCCA CTCAGTCCCT 
    AAAAGCTACC GTGCTGAACA ACGAATTGAT AATAGTAGCT TCAGATATTG 
    TTAACTTTGA TTCTGACTTA CCGCACTACA AAACAGAAGG TGGTGTTTAC 
    AGAGATCCTG CAGATGATGG CCACATATTT TCACCAACAA TAATGTGGGT 
    TGAAGCCTTT GAATTGCTAC TTGAGAAGCT AAAGCCAAAG ATCAACTTTA 
    GCAAGGTTGT GGCCATTTCA GGGAGTGGGC AACAACACGG CAGTGTTTAT 
    TGGAAGAAGG GTAGTCATGC GGTGTTGTCT TCCTTGGATC CTACTAAGAG 
    CTTGTTATCC CAGCTGAAGG ATGCCTTTTC TACCATGGAC TCACCAATAT 
    GGATGGACAG TAGCACAACT AAGCAATGCA GAGAAATAGA AAGTGTAGTA 
    GGCGGCGCAT TGGAGCTATC AAAGTTGACA GGATCTCGTG CCTATGAGAG 
    GTTCACTGGG CCTCAGATCC GGAAGATATA CCGAACAGTT CCGCAAGTTT 
    ATGATGATAC TGAGAGAATA TCTTTGGTGA GTTCGTTCAT GGCATCAATC 
    CTGGTGGGGA ACTATGCAAG TATTGATGAG ACTGATGGTG CTGGGATGAA 
    CTTGATGGAT ATAAACCAGA GAACCTGGTC AAAGACTGTT TTAGAGGCAA 
    CGGCTCCTGG GCTTGAAGAG AAGCTTGGAA AGTTGGCACC AGCATATGCA 
    GTAGCTGGTC GAATTGCTCC TTATTTTGTA GAAAGGCTTC AGTTTGATAA 
    GAATTGCTTA GTTATTCAAT GGTCTGGAGA CAATCCCAAT AGCCTTGCAG 
    GTTTAACTCT GAATACTCCT GGTGACCTTG CAATTAGCCT TGGTACTAGT 
    GATACTGTTT TTGGGATAAC TGCTGAAGCT AAACCAAGTC TTGAAGGCCA 
    TGTTTTCCCT AACCCTGTTG AACCTGATGG TTATATGGTG ATGCTGTGCT 
    ACAAAAATGG TTCATTGACC CGAGAAGATG TGCGGAACAG TTGCGCGGAG 
    AAATCCTGGG ATGTTTTCAA CAGTTATCTA GAGAAAACTC CACCTCTAAA 
    TGGCGGAAAA TTAGGATTCT ACTACAAAGA CCATGAAATT CTGCCGCCAC 
    TTCCAGTTGG CTTCCATCGA TACATTGTTG AAAACCTCAA TGATGTCACA 
    TCCAACAATC TGGTGGAACG TGAGGTGGAA GAATTTGATC CACCATCTGA 
    GGTTCGCGCC ATAATCGAAG GCCAGCTGCT GTCAATGCGA GGCCATGCCG 
    AGAGATTCGG CATGCCTAAC CCTCCCAAGC GGATCATCGC AACCGGTGGC 
    GCATCCTCCA ACGAGCGCAT CCTCCACTCA ATCGCGCAGA TCTTTGGCTG 
    TCCTGTCTTT ACAGTTCAGA GACCTGATTC TGCCTCGCTT GGCGCGGCAC 
    TGAGAGCTGC CCATGGCTGG CTGTGCAATG AGGAAGGGAG CTTCGTCCCC 
    ATCTCCTGCA TGTACCAGGG TAACCTGGAG AAGACCTCCT TGGGTGCAAA 
    GCTCGCCGTC TCAACCGGAG AGGGTGTGGA GGACAAGGAG CTCCTGGAGA 
    AGTACACGGT GCTCATGAGG AAGAGGATGG AGATTGAGAG GCGGCTGGTG 
    GAGAAGATTG GGCGCGCGTA GGTAGCAGCA TTGCAAAGCT GCTGTCCTCG 
    AGTCACAGTT AATTAGAGGG AAATGAAATC ATTGGTAGAA ACTTATTTAT 
    AATATATAGT TAGTAGTGTA TCAAGATCAT GTTATTATGT TCTTGTGCAC 
    GGAATAAATA ATAAATGTAA ATTTGCAAAC TAAACAAGCT CGTCTGTTCT 
    TTCTGTTCAT CAATTAGATG AAACTTTAAA TCTTC

    Gene models with high sequence identity

    1. AT5G49650.1 [+] show detail - xylulose kinase-2
      E-value: 0; Score: 795.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Actin-like ATPase domain 9.3e-47
    superfamily Actin-like ATPase domain 1.9e-23
    HMMPfam Carbohydrate kinase, FGGY, C-terminal 4.1e-27
    HMMPfam Carbohydrate kinase, FGGY, N-terminal 3.6e-06
    HMMPfam Carbohydrate kinase, FGGY, N-terminal 1.6e-16
    HMMPanther XYLULOSE KINASE 2.8e-213
    HMMPanther Carbohydrate kinase, FGGY 2.8e-213

    See the detailed result >

    AT5G49650.1

    Model type
    Protein coding
    Short Description
    xylulose kinase-2
    Curator Summary
    Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.
    Computational Description
    xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR