K18611

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18611

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18611

Determination of introduced cDNA(s)

  • J023103B19 - Rice Full-length cDNAs - Original: J023103B19

    full reading [+] show sequence

    Nucleotide sequence: J023103B19 - full reading 
    GAAGCTGGGC CGCACTCTCA CCCGCTTCCT CTCCAAGCCC CCTTTCAAGC 
    CCAAGCCCAC CAACCCCTCG CCGCCGCCGC CCCCGCCGCC GCCGGGGATC 
    CAGCCTCCTC CACCGGCGCT GCCCGGCATG CCGCACGGAC GCCCGCCGCC 
    GCCGTTCCCG GGAGGGCGGG ACGCGTTCCC GCAGGCGGCG TCGACGGTGG 
    TCCCGGACCC GGCCAGGTTC TTCGCGCCGG CGCTGCTCTC GTCGCCGCTC 
    CCCACCAACT CCTTCTTCCA GAACTTCGTG CTCAAGAACG GCGACCAGCC 
    GGAGTACATC CACCCGTACT CGGTCCGCTC CGCCGCCGCC GCGCTCACCC 
    TGTGCTACCC GGCGCGGAAC CACTCCCCGT CGTTCGTCAT CCAGACGTTC 
    GTCGAGGACC TGACCGTCTC CGCGGCGTCC GACGCCGCGG CGGCCGCGGC 
    GGGGCAGAGG CACCGGGTCG CCGCGTTCGA CGACCTCTCA GTCACCCTCG 
    ACGTCTCGCC GTCGCTCAGG GCGTTCCTCG TCAGGGGCTG CCCCTTTGTC 
    ACCGTCGCCA CCGCCGACGC CGCGGGCCCC GTCGACATCT CCGTCGCGTC 
    CGTCCACGCC TTCATCGAGG TGGCCTCCTG CGACGACGCG CTCACCAAGT 
    GGCGGCTCCG GATGAACAGC GGCCAGACCT TCCTCCTCTA CGCGTCCGCG 
    CCGATCCGCC TCGCGCAGTC CAGCGTCACG CAGCTGTCGG CCCCCGGCTT 
    CTCCGGCGTC ATCCGGGTCG CCTACCTGCC GGACCCGTCC ATGGAGGCGG 
    TTCTTGATCA GTACAGCCGG TGCTTCCCCA CCGCCGGCGA GGCCTCGCTG 
    AACCGCCCCT TCTGCGTCGA GTACACCTGG CGCAAGCAAG GGTGGGGAGA 
    CCTCCTCATG CTCGCCCATC CCCTCCACCT CCGCCTCCTC TCCGAGGATT 
    GCTGCGTCCG GGTGCTCGAC GATTTCAGGT ACCGGAGTAT CGACGGCGAC 
    ATGGTCGGCG TCGTCGGCGA TTCTTGGGTT CTCCGGACCG ATCCGGTGTC 
    CCCCACATGG CACTCGATGC GGGGCATCAG CGACGACGGG GTGGGCGAGG 
    TCGCCGCCGC GCTGCGCAAG GATGTGGATG CCCTTGCTTC CAGCTCCATC 
    ACGACCACCT CCTCCTACTT CTACGGCAAG GCGATCGCCA GGGCGGCGAG 
    GTTCGCCGTA ATCGCCGAGG AGGTCGGCTG CCCTGACGTC ATCCCGGCGG 
    TGCAGCGATT CTTGAAGGCC ACCGTCACGC CATGGCTGGA TGGCAGCTTC 
    CAGGGCAATG GATTCCTCTA TGAACCCAAA TGGGGTGGCC TTGTCACATT 
    GCAGGGATCC AAGGACACCG GCGCCGATTT CGGCTTCGGC ATTTACAATG 
    ATCACCACTA CCATTTGGGG TACTTCTTGT ACGCCATTGC TGTGCTTGCC 
    AAGATTGATC CCTCCTGGGG GAGGAAGTAC ATGCCCCAGG CCTACTCCAT 
    GGTTGCAGAT TTCATGACAT TGTCGCGGAA ACACGGCGCA AGCTACACAA 
    GATTGAGGAT GTTTGATCTC TGGAAGCTCC ATTCCTGGGC CGGAGGTTTG 
    ACAGAATTTG CGGATGGGCG CAACCAGGAG AGCACTAGCG AGGCCGTGAA 
    TGCGTACTAC TCCGCTGCGC TTCTCGGATT GAGCTATGGG GATACTCACC 
    TTGTCTCCAT CGGCGCGACA TTGACCGCAT TGGAGATGCT TGCAGCACAG 
    ACATGGTGGC ATGTCCGTGA AGGTGACACC ATCTACGAAG ACGATTTCAC 
    CGGCAACAAC CGTGTCGTCG GCGTCCTGTG GGCGAACAAG AGGGACAGTG 
    GCCTCTGGTT CGCTCCACCG GAGTGGAAGG AATGCAGGCT GGGGATCCAG 
    CTGCTGCCTG TCCTGCCGAT CAGCGAGGCG CTGTTCCCGG ACATCAGCTT 
    CGTCAAGGAG CTGGTGGACT GGACAATGCC GGCATTGTCA AGGGAAGGGG 
    TCGGAGAAGG GTGGAAGGGC TTCGTGTACG CCCTGGAGGG GATCTACAAT 
    AAGGAATCGG CATTGCAGAA GACGAGGGCG CTGACGGGGC ACGACGATGG 
    CAACTCCCTG ACCAACCTTC TCTGGTGGCT GCACAGCCGC GGCACCGCCG 
    ATGATGGCGT CGTCGGGTTC TCCAGGTGCT GCTGGTACCG CCAGTATTGC 
    CATTGATGGG GGCTGAAATG ATCGCAGCAG AGATTGCCCG AGATGATGCG 
    TTGTTGCTGA AGATCAGGTT GTGTGGGTGA TATGCCGAAG GATACAGATT 
    ATTATAGAGT GGGCTGTTCA GTTTCAGAGT TTCCGTGTGA TTCAAACATC 
    AGGATGCTAC ACACACATCT TTTACACTTT GTTGTTTCAA TAAAAAGTAG 
    TCAAAAGTCA TGGTATGTTG ATATTTTACA TGGAACGCAA TTGGTTCAGA 
    AGTTTTGAGT TGCCG

    Gene models with high sequence identity

    1. AT5G15870.1 [+] show detail - glycosyl hydrolase family 81 protein
      E-value: 0; Score: 769.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G15870.1

    Model type
    Protein coding
    Short Description
    glycosyl hydrolase family 81 protein
    Computational Description
    glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR