K18619

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18619

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18619

Determination of introduced cDNA(s)

  • J023028J20 - Rice Full-length cDNAs - Original: J023028J20

    full reading [+] show sequence

    Nucleotide sequence: J023028J20 - full reading 
    GACTTCGTTG TCATCGTGCG ACTTCTTCGC GTTGTGAGTT GTGACCCGTG 
    AAGACCGCTA TATATACACA CGCTACTAGC CCCTGTTGCA TTGTATACAC 
    ATATTCATTG CCTCATTGGT ACTTTGGTTA GCTATGGGCT CCCTACCCGC 
    CGCCGACAAG CCGTTGCCGG CGCTCCGGTA CCCTCCGGCT CGCCGCGACG 
    ACGACATTGT CGACGACTAC CATGGAGTTA CCGTGCCGGA CCCCTACAGA 
    TGGATGGAGG AGCTGGAGTC GGAGGAGGTG AAGGGGTTCG TGGACGCGCA 
    GGCGGCCGTG GCCGAGGCGG TGCTCTCCAC CTGCGACGAC CACCGCGTCC 
    GCCTGCGCGG GCAGCTCACC GCGCTCTTCG ACCACCCGCG CTACCGCGCC 
    CCGTTCAAGC GCGCCGGCAG CTACTTCTAC CTCCACAACC CCGGCCTCCA 
    GCCTCACAGC GCCCTCTACG TCCAGCACGG GCTGGGGGGC GGGGAGGAAC 
    CTGACGTGTT GCTGGACCCA AACACGTTCA GCGACGACGC CACCGTGTCG 
    CTCGCCATGT TCGGCGTCAG CCACGACGGC GAGCACCTGG CGTACGGCAC 
    CAGCGCGAGC GGCAGCGACT GGGTCACCAT CCGGGTGATG CGCGTGCGCG 
    ACAGGCGGCA CCTGCACGAC GAGATATGCT GGGTGAAATT CTCGGCCATC 
    GCGTGGACTC GCGACGGGAA GGGGTTCTTC TACTCTCGTT TTCCAGCTCC 
    AAAGAATGAT GGGGCGCCAT TGGGTGCTGG GATCAAGACT AGTGTTAATC 
    TCAATCATGA AGTCTATTAC CATTTTCTTG GAACCGATCA GTCAGAGGAC 
    CTGTTGTGCT GGGAGGACCC TGACCATCCC AAGTACATTT ACACCCCTGA 
    AGTTTCAGAA GATGGCAAGT ATGTGATTCT GTCAGTCGCA GAAACTTCAG 
    AACCGGTAAA CAAGTTGTAC TACTGTGACC TCTCGGCTCT CCCTGACGGC 
    CTGGAAGGCA TGAAGGGAAA CCATGGCAAT GCCATGCTTC CTTTTGTTAA 
    GCTTGTGGAT GAATTTGAAG CATACTACGC ACTCATCGCC AATGACGACA 
    CTCAATTCAC ATTTCTCACT AACAAGAATG CTCCAAAGTA CAAGCTGTCG 
    AGGATTGATG TCAACGAGCC ACACTCATGG ATGGATATTC TCCCTGAAGA 
    CGAGAAGGCT GTCCTAGAGT CGGCTTGTGC AGTCCATGGT GATAAGCTTC 
    TGGTAAACTA CCTGTCGGAT GTCAAGTATG TCTTGCAGAT GAGGAGCTTG 
    GTTACCGGGG AGTTGCTCCA TGACATACCC ATTGACATTG GCAGCGTCAA 
    TGGGATCTCT GGCAGACGTG ACAATTCAGA GGTGTTCATC GAGTTTGCTA 
    GCTTCCTTAC TCCCGGAATC ATCTATAGGT GTGATGTCAG CAAGGAGACT 
    CCCGAGATGA ACATATACAG AGAAATCTCG GTTGGTGGTT TTGATCGCAC 
    AGATTTTGAA GCAAAGCAGG TGTTCTACCC TAGCAAGGAT GGAACCAAGA 
    TCCCAATGTT CATCGTGTCG AAGAAAAGCA TCGTTCTTGA TGGATCTCAC 
    CCGACTCTGC TGTACGGCTA CGGTGGCTTC GGCATGAACA TGACGCCCCA 
    TTTCAGCGTC ACCCGCATCG TCCTCATGCG GAATCTCGGG TTCGTGTCGT 
    GCATCGCCAA CATCCGAGGC GGCGGGGAGT ACGGCGAGGA CTGGCACAAG 
    GCCGGGTCGC TCGCGAACAA GCAGAACTGC TTCGACGATT TCATCGCGGC 
    TGGTGAGTTC CTCGTCTCTG CAGGCTACAC GAACCCGAGC AGGCTGTGCG 
    TCGAGGGTGC GAGCAACGGG GGCCTTCTTG TAGCTGCCTG CATCAACCAG 
    CGTCCGGACC TTTTTGGTTG TGCTCTGGCT CACGTGGGTG TCATGGACAT 
    GCTTCGATTC CACAAGTTCA CCATAGGCCG TGCATGGACC TGTGATTTCG 
    GCTGCTCGGA GAAGGAAGAG GAATTCCACT GGCTCATCAA GTACTCTCCC 
    CTCCACAACG TCAGGCGGCC ATGGGAGAAA GGTCACCGGA GGCAGCAGTA 
    CCCTTCCACC ATGCTGCTGA CGGCGGACCA CGACGACCGC GTCGTGCCGT 
    CGCACACGCT CAAATTCCTC GCGACGATGC AGCACGTACT GTGCACGAGC 
    GTGAAGGAGA GCCCGCAGAC GAACCCGATC GTCGCGCGGA TCGACCGCAA 
    GAGCGGGCAC GGATGCGGCC GCTCCACGCA GAAAATCATC GACGAAGCTG 
    CGGACAGGTA TGCGTTCGCG GCAAAGACGA TGGGGATCTC TTGGATCGAC 
    TGAACAAGCC TCCGAGCAGT TGGTGCCTTG GTGGGTGCTA ATGGGTTTAA 
    CTTCTTATAG CATATAACCC TATAAAATTT GAGAGTTGGA TCTAGAATGA 
    GATGAACACA ACTTCTGTAT ATTTTTGGCT TAAAAATATT TATGGGCTAG 
    ATATGGTTGT G

    Gene models with high sequence identity

    1. AT1G76140.1 [+] show detail - Prolyl oligopeptidase family protein
      E-value: 0; Score: 980.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 9.1e-104
    Gene3D no description 3e-34
    PatternScan Peptidase S9, serine active site 0
    HMMPanther PROLYL ENDOPEPTIDASE (PROLYL OLIGOPEPTIDASE) 0
    HMMPanther Peptidase S9A, prolyl oligopeptidase 0
    superfamily Peptidase S9A, oligopeptidase, N-terminal beta-propeller 1.1e-108
    superfamily alpha/beta-Hydrolases 1.1e-66
    HMMPfam Peptidase S9A, oligopeptidase, N-terminal beta-propeller 1.4e-119
    HMMPfam Peptidase_S9 1.8e-70
    FPrintScan Peptidase S9A, prolyl oligopeptidase 9e-50
    FPrintScan Peptidase S9A, prolyl oligopeptidase 9e-50
    FPrintScan Peptidase S9A, prolyl oligopeptidase 9e-50
    FPrintScan Peptidase S9A, prolyl oligopeptidase 9e-50
    FPrintScan Peptidase S9A, prolyl oligopeptidase 9e-50

    See the detailed result >

    AT1G76140.1

    Model type
    Protein coding
    Short Description
    Prolyl oligopeptidase family protein
    Computational Description
    Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 8127 Blast hits to 8050 proteins in 1368 species: Archae - 105; Bacteria - 3923; Metazoa - 339; Fungi - 43; Plants - 244; Viruses - 0; Other Eukaryotes - 3473 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR