K18704

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18704

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18704

Determination of introduced cDNA(s)

J033131K12 - Rice Full-length cDNAs - Original: J033131K12

full reading [+] show sequence

GATATCCTCT CCTACGATAC TGCGCGCTCA GCACAGAAGA GGAAGGTATC 
TTAACTAGCC CAGGATACCA CCACACACCG AGTACTGTTA CGTGTTCACG 
GTCTAGCTAA GCAGTGATCA TGGGCTCGGC GGCTGACGGG AGCCTCGCCA 
ACGAGAAGGC GCCGGCCGAG ACGGTCGGCG TCGGCCGTTA CGTCGAAATG 
GAGCAGGACG GCGGCGGACC CAGCACCGCA AAGTCCCGGC TCTCCGGCCT 
TCTCTGGCAC GGCGGCTCAG CCTACGACGC CTGGTTCAGC TGCGCGTCCA 
ACCAGGTGGC CCAGGTGCTC CTGACGCTGC CCTACTCGTT CTCCCAGCTG 
GGGATGCTCA GCGGCATACT GTTCCAGCTC TTCTACGGGC TGTTGGGCAG 
CTGGACGGCG TATCTCATCA GCATCCTGTA CGTGGAGTAC AGGACCAGGA 
AGGAGAGGGA GAAGGTGGAC TTCAGGAACC ATGTCATCCA GTGGTTCGAG 
GTGCTGGACG GCCTGCTGGG GAGGCATTGG AGAAACGTCG GCCTGGCCTT 
CAACTGCACC TTCCTACTCT TCGGCTCCGT CATCCAGCTC ATCGCCTGCG 
CTAGCAACAT CTACTACATC AACGACAAGC TGGACAAGAG GACGTGGACC 
TACATCTTCG GCGCGTGCTG CGCGACGACG GTGTTCATCC CGTCGTTCCA 
CAACTACCGG ATCTGGTCAT TCCTCGGCCT CGTCATGACC ACCTACACGG 
CCTGGTACCT CGCCGTCGCC TCCCTCATCC ATGGCCAGGT CGATGGAGTG 
AAGCACTCGG GCCCTACAAA GATGGTCCTC TACTTCACCG GGGCCACAAA 
CATTCTCTAC ACCTTCGGTG GGCACGCTGT TACTGTGGAG ATCATGCACG 
CGATGTGGAG GCCGCAGAAG TTCAAGGCGA TCTACCTGAT GGCGACGCTG 
TACGTGCTGA CGCTGACGCT GCCGTCGGCG GCGAGCGTGT ACTGGGCGTT 
CGGGGACGAG CTGCTCACGC ACTCGAATGC GCTGGCGCTG CTGCCGCGCA 
CGGCGTTCCG GGACGCCGCC GTGGTGCTCA TGCTCATCCA CCAGTTCATC 
ACCTTCGGCT TCGCCTGCAC GCCGCTCTAC TTCGTCTGGG AGAAGCTCAT 
CGGACTCCAC GACTGCCGCA GCCTCTTCAA GCGCGCCGCC GCGAGGCTCC 
CCGTCGTCGT GCCCATCTGG TTCCTCGCCA TCATCTTCCC CTTCTTCGGG 
CCCATCAACT CCGCCGTCGG CTCCCTCCTC GTCAGCTTCA CCGTCTACAT 
CATCCCCGCC CTCGCGCACA TGATCACCTT CCGCTCCGCG CACGCTCGTG 
AGAACGCCGT GGAGCCGCCG CCGCGGTTCG TGGGGCGATG GACGGGCACG 
TTCATCATCA ACGCGTTCGT GGTGGCGTGG GTGCTGGTGG TCGGCTTCGG 
GTTCGGCGGC TGGGCCAGCA TGACCAACTT CGTCCGCCAG ATCGACACGT 
TCGGGCTCTT CACCAAGTGC TACCAGTGCC CGCCGCCCCC TCTGCCGCCG 
GCGGGCGCCG CTCCGAACGC CACCTGGCCG CCGTTCCCGG CGACGCCGTT 
CAACGCCACC ACCGCCGGCC TCGCTCCGGC CCCTGCTCCT TCGCCGGCGC 
ATTTCTTCGG CCGCCACCAC CGGCATCACA GCCACGGGCT CTGAACACTG 
AAATGTACGT ACCAGGGCAA TGCTCGAGCT TTGGTTTAGC TATAGTTGTT 
CACTAGCGCC GTCACTAATT AGTCTTAGCT TAGCACAAAG CTGCATCTTC 
TCTAGCTATC AGTAGCATGT CAGTCAGACG GAGTATCCCG TTTCAAGTTC 
CTTGGTTCTG TACTGCCTCC TGGCGTGGAG CTCAAAAAAC GAACAGAAAA 
AAAGGGAATG TTGCTACGGC CGCAGATGCA AGAGCCAGCT AATCTAGCCT 
CTTTACTTTC TCTC

Gene models with high sequence identity

AT2G21050.1 [+] show detail - like AUXIN RESISTANT 2
E-value: 0; Score: 798.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	AUX1-LIKE AMINO ACID PERMEASE	0
HMMPanther	AMINO ACID TRANSPORTER	0
HMMPfam	Amino acid transporter, transmembrane	1.1e-73

See the detailed result >

AT2G21050.1

Model type: Protein coding
Short Description: like AUXIN RESISTANT 2
Curator Summary: Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.
Computational Description: like AUXIN RESISTANT 2 (LAX2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUX1 3 (TAIR:AT1G77690.1); Has 1017 Blast hits to 1012 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 224; Plants - 668; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Link: InterPro Scan - TAIR