K18712

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18712

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18712

Determination of introduced cDNA(s)

J023018P15 - Rice Full-length cDNAs - Original: J023018P15

full reading [+] show sequence

GATTCCATTC CAGTGGTAGA AGATCCGAGA TCGAGGAGGA GGTGAGGAGA 
GGAGCAAGAA GAAGAAGAAG AAGAAGAAGA AGAAGATGGG CATGGAGAGC 
GGAGATGCCC AACTGCCGCT GCTCCACCAC CAGGCTTCCG CATCCAATCA 
GCACTATACC AAGCCCCCCT TCAACTGGAA GGCTCCTGCT CTTATCTTGG 
CCTTTGAATT CTTGGAGAGC ATTGCCTATG CTGGCATCTC CCTCAACTTG 
GTCGTTTATC TTGGAACCGT CCTCCATGGA ACTACCGCCT CTAACGCAGC 
CAATGTTGAT ACATGGAACG GAACCACTTT TCTTACACCG GTGCTTGGAG 
CCTTCTTGGC TGATACATAC TGGGGAAAGT ACAAGACCAT TGCCATCTCT 
ACAGTTTTCT ATCTTATTGG GTTGCTTGTA ATTACCGCCT CTGCTGTCAT 
CCCATCACTA CAACCTGCTC CATGCAATGG GAGCTCATGT CCTCCTGCAA 
CAGGGTTTCA GTATTTTGTC TTCTTCACCG CGCTCTACCT TATTTCGGTT 
GGCACCGGGG GTGTCAAATC AGCATTACTC CCCTTTGGAG CTGACCAGTA 
CAACGATTCA AACCTCGAAG AGAGTAAAAA GAAGCAATCT TTCTTTAGCT 
TGTTCTTCAT TGCTATCAAC CTTGGAGTGT TCATTTCGGG CACTGTCGTC 
GTTTGGATAC AGCAAAATGT TGCTTGGTCT CTCGGATTCG GCATCTCCTC 
AATATGCCTT GTTGTTGCCA CAGTTGCCTT TTTGGCAGGA ACACCAGTGT 
ACAAGGTCCA GCTTCCCAGT GGAAGCCCAC TCAAGAGTGT TGTAATGGTT 
TTTGTTGCCT CTTTTAAGAA GAGAAAACTG GAGGTTCCTG CCGATAACGC 
ACTCCTGTAT GAAGGGGATG ATGCTGATTT AAGCAATGGA CAATCAGTCA 
AACTAGCACA TACTGATGGT TTCAGGTGGT TAGATAAGGC GGCAGTGGTT 
TTTGAGGAGG TGGAAGAGAT AAATAAGGAT GAGGGTGGGG GTGGAGGGTG 
GCTGCAGTGT TCGGTAACGC AGGTGGAGGA AGTGAAGATT CTGCTGCGGA 
TGCTGCCGAT ATGGGTGACC AGCGTGCTGT ACGCGGCTTC CTTGGGTCAG 
ACGGCCACCA CCTTCGTGCA GCAGGGGAAT GCCATGAACA CCAAGATCGG 
ATCCTTCTCT GTCCCGGCGG CATCCCTCAA CTCCGCCGAG GTCATCTTCA 
TGATGATCTG GGTGGTGTTC CAGGACACGG TGGTCGTCCC GATCGCCAGG 
CGCTACACCG GGAACCCCGC GGGGCTGACG CAGCTGCAGC GGATGGGCGT 
GGGGCGGTTG CTGGCGGTGC CGGCGCTGGC GGTGGCGGCC GTGCTGGAGA 
CGTGGCGGCT GCGCAGCGTC AGGGACGGCG GCAACCTGAG CATCGCGTGG 
CAGCTGCCGC AGTTCGTCAT CCTGGCCTGC TCCGACGTCT TCTGCGGCAT 
CGCTCAGCTG GAATTCTTCT ACTCGGAGGC CCCCGTGTCG ATGCGGAGCC 
TCTGCTCGGC CTTCTCCTTC CTGGCGCTCT CGCTGGGCTA CTACGTCAAC 
TCCCTCGTCG TCTCCATCGT CGCCGTCGTC ACCACCACCT CGAACAAGGG 
CTGGCTCCCC GCCGACCTCA ACGACGGCCA TCTGGACTAC TATTTCTGGC 
TCTGGACGGG GATCAGCGCC ATCAACTTTG TGGTGTACGC CGCCTTTGCC 
AAGAATTATA CCGTCAAGAG ACTCGCCGTC CCGCACTCGC ACTGATCGTC 
TCCCTCATCC ACCCAACACT GCCTTGTATT ATTCCAATCA ACCATTCTTG 
TATTATTATT CCACTTGATT CGTTGAGCAT GTATATAAAC CAAATAAAAA 
ATAAACCAAA TAAAGGGCTG AATCCATGCA TTACCTTC

Gene models with high sequence identity

AT2G02040.1 [+] show detail - peptide transporter 2
E-value: 2e-124; Score: 443.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	OLIGOPEPTIDE TRANSPORTER-RELATED	3.4e-270
HMMPanther	OLIGOPEPTIDE TRANSPORTER-RELATED	3.4e-270
HMMPfam	Oligopeptide transporter	3e-78
superfamily	Major facilitator superfamily, general substrate transporter	0.00000000000011
PatternScan	PTR2 family proton/oligopeptide symporter, conserved site	0

See the detailed result >

AT2G02040.1

Model type: Protein coding
Short Description: peptide transporter 2
Curator Summary: Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.
Computational Description: peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink).
Link: InterPro Scan - TAIR