K18734

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18734

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18734

Determination of introduced cDNA(s)

  • J033042A17 - Rice Full-length cDNAs - Original: J033042A17

    full reading [+] show sequence

    Nucleotide sequence: J033042A17 - full reading
    GGTGGATTCC TCCGCCGTCG CCGAGCCTAT CTGAGCGCGC GATGGCCACG 
    GATCCGAGAG GTCGGCGGCC GCGGCACCAC GCGGCGGTGA ACGAAGTGCT
    CTCGACGCTC GCCGCCGCCA ACAGCACCCT CGCCGACGTG CAGCGCCGCC
    TCGACGCCGA CTTCCGCGCC GCCTACCCGG ATCACGCGAA TCCGGTGAAG
    CTGGTGGCGC GGCTGAAGCG GATCCAGGAA GAGGTAGCGG CGGTCAAGGG
    ACTCTGCCGC GATCTGCTCA CCCAGAAGCA GGAGTTGATC GACGCAATGC
    GGACAAGCCT CGCGGTGCAG CGCAGCGCCG TGCAGCGGCT GCTCGCCTCC
    TCCGGGCTGC CCCCCATGTC CGAAGAGGAC GCCGCCACCG ACGCCAATCT
    CAACCAGATC ATCGATGAGT GGACGGCGCA TGTTGGGCCA GACACAGGAG
    ATGACAAGGA TGAGGATACC AACCAAATCT TCTTCGCCGC TGTCGTTTAG
    AGCGAGTGAG AGCGGCCACA ACCTAGAGCA GAATTCTATG CAAAGTCAGG
    AGGTCTCATG CTCTGCTGCT CATGTCATTG TTTTGTGTGT TTTGGCGAGA
    AGAGCTGCCC GTGCTGCAGC ATGCGGTCTC AATTTGCAGA TCCATTTCTA
    CAATGAAGGC CAGCGTACTG GAGCTGGCCG CGATGGAGAT TCTACTTCAC
    ACATCTGTTG CTGTTGTGGA GAGAATTGAT TAGAAAATCG TAGACTTTGA
    TTGGATTGCG GTGTGGTTAG CAGGAGAGTA TAAAACTGAG AGCCTGTTAG
    CTCCTCTCTC GCTTTTCTTT TTGTGTGTGT TATTTTACTT TTCTCATACT
    CAACCTTTGT AGAATATGCT GTTGAATAGT ACAAAGTGAG GGAAAAATTT
    TGCTTCGTAT AAGCAGGTTG ATGCAGATTG TGATATGCTT TTTTCCCTCT
    TTTTTTGAGG AACAGTTGAT GATGAGTTTG TCAACAAGGA ATTGTGTTGT
    TGAGTGC

    Gene models with high sequence identity

    1. AT2G24970.1 [+] show detail - unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazo...
      E-value: 1e-20; Score: 97.40

     

    InterPro Scan Digest

    See the detailed result >

    AT2G24970.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR