K18827

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18827

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18827

Determination of introduced cDNA(s)

  • J023110G09 - Rice Full-length cDNAs - Original: J023110G09

    full reading [+] show sequence

    Nucleotide sequence: J023110G09 - full reading
    GGCTCGCTCG CACACAGTCC CCAATGGCCT CCCGGAACGC CGACCCGCCG 
    CGTCACCACC CCTCGACGCC GCCTCTCCTC CTCGCCATGC GCCACCTCCC
    ATTCCCGGGC GTCCACCGGC CGCGCGCGCT CCCCGCCCCG GACCTCGCGC
    CCCTCGCCGC CCGCCTCGAA GAGCTCGCTG CCGCCGCGGC CGCGCACCCG
    CTCCTGAAGC CGCTCTTCGC CTTCCACTCC CACCTCGCCG CCTTCTCCCA
    GAGCAGGAGG CGGGCGATGG CGACGATGCG CCGGCGGCGG ACGACGGGCG
    AGTGCCCGCT GTCCGGCGAG CACTGCTTCG CGGCGGTGCT GGGTGACTCC
    GTGGCCGGTG TGGTGGTGTC CAGCGGCATC AACAACTTCC TCAGCCTGTA
    CAACACCGTC CTCGTCGTCA GGCTCGTGCT CACCTGGTTC CCCAACACGC
    CGCCCGCCAT CGTCGCGCCC CTCAGCACGA TATGTGATCC GTATCTGAAC
    ATTTTCCGGG GAATCATCCC GCCGCTGGGG GGAACGCTCG ACCTGTCGCC
    CATCCTCGCG TTCCTGGTCC TCAACGCCTT GTCCAGCACC GCCGCCGCGC
    TCCCGGCCGA GCTCCCGGAC CCAGCACCGC CGACGTCTCG CGGCGCAACC
    TCGTCAAGCT CCGTGCTCAC CGCAAACCGG AGGAAATGGA TGCGGAGAAT
    CCGCCCGGTA AAATCGCAGG AAGGAGAGGA GGAAATGTGA TGCTCTATCT
    AGGTGGGACT TCGTTTGAAC CAGTTTGGAC AGATGGAATC GCTGTCTCAC
    TGACATGGTG GCCATCAGAC TAAGAGTCTG GGCATGTTCA GACGCGAACG
    ATCATCAATT AAGCAGGCGG AATTGTTTTG GTTGTGTTGC TTCAGAAGAT
    TTTTGCTTGT ACGCTGTAGA ATCCATCCCA TTGAGGCTTC GTGTTTTCTG
    CATGTATGCA GAGGAACAAC CTGCTTGACT AGTTTGACAT GTTCCAGTCT
    TTTGGATGAG TTTGTTACTT TGTTGACG

    Gene models with high sequence identity

    1. AT5G21920.2 [+] show detail - YGGT family protein
      E-value: 5e-28; Score: 122.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G21920.2

    Model type
    Protein coding
    Short Description
    YGGT family protein
    Computational Description
    YLMG2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT4G27990.1).
    Link
    InterPro Scan - TAIR