K18903

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K18903

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K18903

Determination of introduced cDNA(s)

  • J033044P17 - Rice Full-length cDNAs - Original: J033044P17

    full reading [+] show sequence

    Nucleotide sequence: J033044P17 - full reading 
    GAGGGTTCAA ACTCCTCCCC CAAAATCCAA TCCCCAATCC GCGCCGCCCC 
    CATTCGTCTC CCCTTCTTTT CAAATCCCCT CTCCTCTCCT CTCTCCTCGC 
    CGCCACCGCC TACCTACCTC CGCCGCAGGA AGCTTCCAGA AGGTTCCGGG 
    AGGCCGCGGC GGAGAGGCTT CAGGGGTACA GGTTGAGGGA GAGGAAGGTA 
    TGGTTTGGTG AGTCACAGGA AGGGATGCGG AGCTAGAAGA TTGGAGGCTA 
    CAATGGCTCA AGCCGCTGTT CAATCTTCTC TGAATGGTGA CTTGTTGATT 
    GGGAGGGCCG CGGGAGTTCC GAGGATGAAG AGGAAGACCC CCTCTGAACT 
    CAGAGGAGAG CAATTGAAGC GGCGTGCTTC TGACAAGCCT GCTAATGACC 
    AATCACTCCA TTCTGCGGCA TTTGATAGGG CAAGCAATGG GTTTCGGAAC 
    CCAGAGCAAT CAAAAATATC GAAATACATC AGTACTCGTG TTACAGAGGT 
    GTTCCCAGTA AAAAAATCTA GAAACCTTGG AAAGGAAAAC TTCAAGAATA 
    ATGAGAAGGC TCCCAAGTCT GCTGATGCTG TGACAACTTC TGATTTTGCA 
    TCACCTTCAC TCCCATGTGG TTATGGTGAC TCTGCTAAGT TGGACTCTGC 
    TGTTCCATCA CATACTGAGG CAGCTAAACC AAGTTTTAGG AAAGTTGAGA 
    AATGCAGTGA AAATGCTTTG CGGAGTGTAT CTGAGCTCCA TATTGGTGAT 
    GAGCAGCAGT CTGGCACTAA TAAATTTGAT ATGGAAAAAG TACTCAAAGG 
    TTTTGGAGCT CGTGATGCTT TTGTGGCCTC TAAGCTCACT GACCCAAACA 
    TACAAGTTGG TGTTGTACCC TCGAAATCTT TGGATTTGTG CCCTTCTGAG 
    ATCGCTGTTC CAGGAAAAAG AGCTCCTTTG GATCTCACCC TGAAGACTAC 
    TTTGCAATTT GTTTCATCAT CTTCTGTAAA GTGGTGTCAC AAGATAAGTA 
    CAAGTTTTGG TAGGAGCAGC ATTGTAGGAC CCATTGCCCA AAGTTATCAT 
    CATGGGTGTC AAAATTCAGG ATGCTCAAGG CCTGAGAGAA ACAAGGAATT 
    CTTGTTCTCA AAGGCACTAC AATCATGGGT ATATCCACAA TCCTTGTTGC 
    CTGCTTCCAT CATATCTGCA ATGGTATCAT CAACTGTACG AGGAGAAAGT 
    GATTTTCTCC TCAAAAGGCA TCAGGACTGG GAAGATTCAT TTCAGAATCT 
    TTACTACATG CTCCGGAAGA ATCTGTTGAA TATTTTTTAT GTTTATACGC 
    CACAATTTGT TGCTCTCTTC ATCGGTGGAA ATTGTTTGGA CAAGAAGCAG 
    ACCTGTAATG CGTACCTATC ACAATCAACA CGTGGGATAC GATCATTGCT 
    GCGAAGACAT GGTGTTTGTT TTTCTATGCC TCTTTGCAAC ACTGAAGTGG 
    AGCAGGTTAC AGAGGATGAC CTGATTGAAC TTTCAGAAAT CCAAAAGCGC 
    AATCTAGGCC AGGCGCTCCA CATTGACGCT ATGTCTGAAG TCGACAACAC 
    CACACAATCG CTTCTTTCAT TTGTGGGCAA TAAGAGTGTT CATGGTTTAT 
    ATGACTTCTT GTTGAACTAC AAGTCATTCT TAAATTCTCT ATCTGCCACA 
    GATATCCCGG TGTTATATTC CCCGGTGCCG TTTCAAAATG GCTGCCTCCA 
    TATTCCAGAG GTGAAATGCA AGGAGATGAG GAAGGCAGAT ATAGGCCTGG 
    TTTCAGGTGG GTTTGATGCA GGAGAGCCTG GATCTACTTT CGCTTCTTTA 
    ACGGGCAATA TCTGCTATAG CATGGAAATA AAGGATCCCG TACTTCCTCC 
    ATGGGTTGTT TCTGGAATCT GCGCTGCAAT GAGCTCTGAT GCAAATAGCT 
    TCGATTTAAT GATGGCAACA GAGCCTTCGT CGATGGGCTT AAACGCTGCC 
    TTGAGCTGCG TAAGCTCAAA TTCCCAGTCC AAGGCACATT CCTCTGAAGG 
    CTGTGAATCA TTGGGCATCC CTGAGGCCAC ATTGGTTCCC TCCTTGCGAT 
    CTGCATCTTC TCTGCGGCGC CTCAGCTACA AGGATGGCGA GTACATCGCA 
    TACACAACGG TGTGAGCTAC AACGCAACAC CTCGAAGCCA TAGCTGGGAA 
    GCAAGACAAG TACTCCTATT CCAGTCAAGT GCAGCCACTT TTGATGTTCT 
    ACGACTACCA ATGGGGGTTC TATCTGGTTG AGCTCCTCCC GTCAAGAAGC 
    CTCAATGCCT CGTCCATGAG ACAAGCAAGG CAGGCAGGCA GAGAAGCTGT 
    TAGCTGCTGC TGGTTTTGTG GTTTTTTTTG CAAGGCAATG TGTCCAGTAT 
    CTGGAATCAT CTAACTGTTT TTGGGTGAGC CTGTAGATTA TCTACAGGAC 
    AATGAGCTGC TCTTGAATGG TGCAGTAATT TATGGGATTG TACAGTGTAT 
    TTGATGCCCT TGACAGTGCA TCCTTCGATG ACTGATGGGG GGGGGGGGGG 
    GGTAGTGAGG AGGGGGAAGT GACTCTTTTA TGGCGTTCTC TGCTGTCATC 
    CTCTCTAGTC TGCAAGATAA TTGCGCTTGA TCTTTAACGT TGC

    Gene models with high sequence identity

    1. AT3G54750.2 [+] show detail - unknown protein; Has 145 Blast hits to 145 proteins in 60 species: Archae - 0; Bacteria - 0; Meta...
      E-value: 4e-101; Score: 366.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G54750.2

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 145 Blast hits to 145 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR