K19119

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19119

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19119

Determination of introduced cDNA(s)

  • J033071L05 - Rice Full-length cDNAs - Original: J033071L05

    full reading [+] show sequence

    Nucleotide sequence: J033071L05 - full reading 
    GAGCCTTAAG CTCGAACGCG GGTTGGTGGT TGTACCAGCA GCAGCAGGGA 
    ATCATGGACT CGGAGCACTG GATCTCGAGC CTCGCCGCCG CCAAGCGGTT 
    CTACGCGGCG CAGCTCGGTC ACGTCGACGA TATGGCGGGG ATTGGAATGG 
    AGGAGGTGGA GATGGAGATG GAGGATGATG GCGAGGGCAT GGAGCTGGAG 
    CTGGAGATGC AGCTGGAGGA GGCGACGTGG CCGGACGTGG CCTGCCCCTA 
    CTGCTACGAG GACCACGACA TCGCGTCCCT CTGCGCCCAC CTCGAGGAGG 
    ACCACCCCTA CGAGCCCCAC ACCTCGCCCT GTCCCATCTG CTTCGAAAAG 
    ATTACAAGAG ATATGTTAAA TCATATCACC ATGCAACATG GTTACTTGTT 
    CAAGAGTGGT CGCAGGATGC GCAGATTCGA TATTCCCGAG AGCCAGGCAC 
    TTTCTTTACT GAGCCGAGAT CTGCGGGATG CTCAGTTACA GGCACTTCTA 
    GGAGGTGGTC ATCGTCAGCG AAGAAGCAAC ACTACTGCCA CAAACATTTC 
    TGCTGATCCT CTGCTTTCTT CGTTTGGCCT GGGCTTCTCA ACATTGGATT 
    CAGAGGAACG ATCAAAAGCA CCAGTTCCTA TTCCTGATGA TACATCAATT 
    CATAAGGATA CTCCTGCTCA GCCATGGGAA TCAAGGATCG ACTCATCGCT 
    CACGAGTGAG GAAAGGGAAC AAAAGCGGAA ACAAGCCACT GACAGAGCAA 
    CCTTTGTGCA AGGCCTGGTG CTCTCCACTT TATTTGAAGA CTGACTGTTC 
    AAGTAGCCCT AGTTTTTCTT GCTAGATGCA TGTTTCCTCT CGCTGGTTCC 
    CATAAAAGCG CAATGTTCCA CCTGATTTGG TGAATCTGAT TTCGTCAACA 
    GTGAGATGGA TGTGCTTCTG GTGCCCCGTT GTTCTTTCGC TTCAGTAAAG 
    CGCGAAGTTG ATTTGGGCAT GATACACACC TTAATTTATG TCAGCTGCCC 
    TGTACCATTG CTTTTTATGA ATTAACGGGT AGCCACACCT TGACTGTAAC 
    TCGTTGTTGT ACCTCTCCAT ACTGTCTAGG AACATTGGTT TGTACAAACA 
    TAAAAGCTGT TACATGTTGT ACAATGCAAA GGCAAATGCA GAAGCACCGT 
    TTATATCG

    Gene models with high sequence identity

    1. AT3G06760.1 [+] show detail - Drought-responsive family protein
      E-value: 1e-24; Score: 111.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G06760.1

    Model type
    Protein coding
    Short Description
    Drought-responsive family protein
    Computational Description
    Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G49230.1); Has 246 Blast hits to 246 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR