K19215

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19215

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)
    (Adult plant::Growth::slow)
fruit (PO:0009001)
  • decreased length (PATO:0000574)
    (Silique::Shape::short)
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
    (Seed::Number::few)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19215

Determination of introduced cDNA(s)

  • J013156C01 - Rice Full-length cDNAs - Original: J013156C01

    full reading [+] show sequence

    Nucleotide sequence: J013156C01 - full reading 
    GAGAGAGAGA GAGAGAGGGC CGCGGCCACA CGACACAGGT ATTATAATTA 
    GGTAAGTGAG GACCGAGGAG ACAAGATGGT GCAGAAGGAG CTTTCCCAGG 
    CATGGTGGTT CGACAGCCAC AACCTTGCAA GGACATCTCC ATGGCTAACC 
    AACACGCTTT CAGAACTAGA TGACAAGACC AAGCAAATGC TCAAGATGAT 
    CGACCAGGAC GCCGACTCGT TTGCGCAGCG AGCCGAGATG TATTACAAGA 
    AGCGCCCCGT CCTGGTGGAC ATGCTCGGCG ACCTGTACCG AACACACCGC 
    TCGCTGGCAG AGCAGCTTGA TCTCCTCAAG AACGGCAATG GCACACGCCA 
    CACCGTGTTC GGGCCATCCT CCTGCACCCA GAGCTGGTCT CATCAGGCAG 
    CAGCAGCAGC AATGGGTGGC AAGGGAACAA CAGGGAGCAG GTCTTCGATC 
    TCACTCTGCT CAGACAACTA CGACTCTGAA TCTGAAGTCG ATGACCCTGA 
    ACAAGAAAAC ATGGAGGAGG AACTGTCTGA ATCCGAGGAC ATGATGAAAC 
    ATCCTTCACA AAGCCAAGCG GATCAAGCAG CGCAGCTAGA GCTGATGCAC 
    GCGGAGATCG AGATGCTCAA GGAGAAGAAC GCGGAGCTGC AGAAAGCAAG 
    TGCAGAGAAT GAGATGCTCA AGCAGAAGAA CGAGGAGCTG CAGAGAGTGA 
    GCGAGGAGAA CATGGCCCTG AAGGCGGAGC TCGCGGCGAA AGACGAGGAG 
    AAGAGGGAGG TGATCAGGCA GCTCGCGTCG TCGTTCGACA TCGTCAAGAA 
    GGAGAATTTC ACCTTGCGGG AGTACATCAT CAAGAACTCA AAGAACTCCT 
    CCTCCTCCTC TCGTGGCTTC GATTTCAAGA AGCTGACCAA GGACCTGTTC 
    ACTGCGAAGC TCTTCACAGC TCACTGCAAG GCTACTACAG GTCCAATGGT 
    TGCTCTATGA GCTCGGTGCA GCTGATGAAC TATTTCAGAG AGAAAACGGC 
    GTGCACACCA TCCTCCTGAC AAACCATTAG ATCCATGAGA ATTGTTGTAG 
    CTCATGTGCA TATAGATAGA TACTATAAGC ATGTGCCCCC TCCCTCCCTG 
    TCTGTCTGTT TGTTCTATTC TTATTCAGGT TTAGACAGTA GAGGATTCGT 
    TTTGACTGTC CCTGTGAAAT ACCCATGTGC ATCAGTACTT ACTGCAGTAG 
    AAGAATTAGC CGTATGAATG TTTGTATGAT ATGATTGTGT TAATTATAGT 
    AGAGATTTTG GGTCATGTTT ACATC

    Gene models with high sequence identity

    1. AT1G03470.2 [+] show detail - Kinase interacting (KIP1-like) family protein
      E-value: 1e-30; Score: 131.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    HMMPfam KIP1-like 4.2e-36

    See the detailed result >

    AT1G03470.2

    Model type
    Protein coding
    Short Description
    Kinase interacting (KIP1-like) family protein
    Computational Description
    Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G47920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR