K19218

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19218

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19218

Determination of introduced cDNA(s)

  • J013127M11 - Rice Full-length cDNAs - Original: J013127M11

    full reading [+] show sequence

    Nucleotide sequence: J013127M11 - full reading 
    GCTTGCCAAC AGTACAGAGG CCTCGCTTGT TCATCTTCGT CTCGGCTCTG 
    CCTGAACCTT AGCGCCATGG ACGGCAGTGG TGTGCGCCGG ATTTAAGCTT 
    TGTTTAGGCT GATGGGTCTT CATGCTTCGG TTCATCTTCG TCTCGGCTCT 
    GGAGTTCTTG TAAGTGGACG AAACGATGAA ACTTGAAGTG AAGAACTGAA 
    GATCCTGTTG AGTTGGTGGT TGGTACATTT CAAGTGAAGA ACTGAAGAAT 
    CGTAGAGGGA ACAATGTCGG AGATGGAAGG AGCTCTGAGA TCCTGCATGG 
    AGCAGCTGCT CATCGCCAGG GAGGAGCGGG AGCAGATCAT CGTGGAGGCG 
    GCCAGCGAGA TCTCCTCGGA GAAGAAGAAA GCGCGGGAGC TCCAGCGGAA 
    GCTCGACGCC GCGACAAAGA AGGCCGCGAA GCTCGCCGCC GAGAACAGCA 
    GCCTCGCCAA GGCCCTCGAC GCCAAGGACG CGGCGATCGG CGAGCTGAGG 
    GAGTCCAAGT CGGCCTCCGA CGGCGAGCTC GCCGGCGCGA GGGCGAGGCT 
    GGACGCGGCG CAGAAGCAGG CGGCGTCGCT GCAGTACGAG GTGCGGATGC 
    TGCAGAAGGA GCTGGAGATC AGGGGCCAGG AGCGGGAGTA CGACCTCCAG 
    TCCGTCGACG CGTCGCGCCG GCAGCAGGCG GAGAGCCAGA AGAAGATCGC 
    GCTGCTGGAG GGCGAGTGCC AGCGGCTGCG CGCCATGGTG CGGAAGCGCC 
    TCCCGGGCCC CGCCGCCATC GCCAAGATGA GGGACGAGGT GGACCAGCCG 
    GCGACACCCA GAAGGTCGCG CTCCGTGGCG CCGATGTCGC CGCGGTCCGT 
    GGCGCCGGCG GCGCCGATGA CACCCATGTC GACGTCGGCG CGGCCGATGA 
    CTCCCACCAT GTCAGCGCGG CCAATGACGC CCATGTCGGC GCGGCCGATG 
    ACGCCGCGCC GTGCCGCCGC GGCGGAGCAC GAGACGCCCG CGGCGGCGGC 
    CAAGCTGCGC GCCGTCGAGG ACGAGAACAA GGCGCTGAAG CAGACGCTGG 
    CGAAGAGGGA CGCCGAGCTG CAGTTCGTGC AGATGAAGTA CGCCGACGAG 
    GCGTGCAAGC TCTCCGTGCT GCAGCGGCAG CTCAGCGAGC TGACCGAGGA 
    GAACAAGCAG CTGAGCGACG CCCATGGCCA GACGGAGTCG TGGGCCTCCG 
    CGCTGATCTC CGAGCTGGAG CAGTTCAGGG CCGCGAAGCT GCAGGGAGCA 
    GCAGCATCTG AGATGAGCTT GCTCGACGAT TTCGCCGAGA TCGAGAGGTT 
    GGAGATGGCT TCAGGTGGCC AAGGATTGAG ATCGCCCAAG AATGCGCATT 
    CGGAAGCGAT TTCTTCAGAG AAGAATGATA AAGACACTGT CCTAGAAAAT 
    GGTATCTCTA TCTCCAATGG CCAGCCTGAA TGGGTTCAGG ATATGTGCAA 
    GCTTGTGATG CAGAAGCATG AAACCAGTGG GGAAAACATT GACACAATTC 
    TTGAGGAGAT AACTCGTGCA TTGGATCAGA GTGCTAATAA TCAGAAAGGA 
    GATGATTTGA ATGGATCATA TGACTGGAGC ATAATGAAGG AAATGGTGTT 
    CAGCCTGACT GAAAAGATCA CCTCTGTTAT TGGCATATCT GAAGAAGGCA 
    ATGTTGCAAG TTCTCAAAAA TTGCTGCTTG ACAGGTCTGA ATTTTGTGCT 
    CGCCTTGAGC ATTTGGTCCA TGTCTGTCAT GATCTACTGC ATGGTAAAAC 
    TGACCTTGAA AAGTTTGTGC ATGAGGTTTG TTTGGTTCTA GAGTATATAA 
    TCAACCAGTA CAAGAATATA TCATTCCAAG AACAACCAGA CACTGTGAAT 
    AATAATACAG AGAATTTGGA TGGAGAGGAA TCATTTGGTA ACATGAATGG 
    TGGATGTGAC ATAAAAAGTC CGAAATCATC ATCTGCTCCA GACATACAAA 
    CTGAAGCACT GGAAGAATCA ATTCAGTCGG TAGAAGGCCG AAAAACAGAT 
    CATATTTTGG TTAACCAAGA AGAGAGTCAA CTTGATGAAG AACTCACAAG 
    AGTTATACTA GACCAGGACG AGAAAATCAG TCAGGAGAAC TCAGCATCCT 
    GTGAGATAGA AAGCCCCCAT GATCATCCAA GTGCTGAAAC CCTGGCAGAG 
    AAAGAGGAAA AGCATTTAGC ATCAAGTTCA GAGATATCAG CAGCGGCTGA 
    GAAGCTTGCA GAGTGTCAGG AAACCATCAC AAATCTAAGC AGGCAGCTGC 
    GAGCTCTCAA GAGTCCGGCG GTTTCAGGCA ATCTAGACAG CCCAATGTCC 
    AACTCCAGAC CAAGCTCATA TGACTACAAG CCCCAGTCAC TTGCATGCAT 
    TCTTGCTGAA GGGGAGGACT CCAGCACTGA GGATGCCATT TCTCCTGCAA 
    CCAAAGAGGT GCACTCCAAG AAAGAGCCTG ATGCTGCATC ACGGAAAAGC 
    GTAGCACAAG ATGGTAGTGT TAATGCTGCC CTCAAAGCTG TCGAAGAGGA 
    ATTAACACAA ACCGTTGTTC ATCCGATCTT CCCAGAGCCA TCCCAAGAGA 
    TTATTTCTGC TGATCTCAAG AAGAAGAGAC GGAGCCCCAG CTTGCTGGGC 
    AGGATAATGT TCAGAAAGAA AGTGGAAGGC AGCTAGGTCA TGCTGCTGAT 
    CTGGTGGATG CACTGTGCTG GTAAAAGCTT GCAAAATCTA GTAGCGCTCC 
    ACCACTATGC TGTCACTGGA GATTTCGACT TTGAACGAAC GAGCTTGTTC 
    TGTTTGTTGA GCATTCCTGT TCCTTAGGGT GCAACCTTTT TGGACACGTA 
    TTCTGTCACA GAGACTGATG ACTTGTGGTA AGAGACTCTG AGCACATGAT 
    CTGTATCGGT TTTCCTTGAC ATGGACAAAT TTTCTTTTTG TATTTATGGC 
    CTCCATGGTT GTGTAAATGT TAATTTAATA AGTT

    Gene models with high sequence identity

    1. AT2G23360.1 [+] show detail - Plant protein of unknown function (DUF869)
      E-value: 3e-52; Score: 204.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Egg jelly receptor, REJ-like 8.599
    HMMPfam Protein of unknown function DUF869, plant 2.9e-166
    HMMPfam Protein of unknown function DUF869, plant 2.3e-33
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT2G23360.1

    Model type
    Protein coding
    Short Description
    Plant protein of unknown function (DUF869)
    Computational Description
    Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 38218 Blast hits to 24021 proteins in 1620 species: Archae - 547; Bacteria - 4231; Metazoa - 19834; Fungi - 3463; Plants - 2306; Viruses - 121; Other Eukaryotes - 7716 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR