K19246

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19246

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) increased width (PATO:0000600) (Rosette leaf::Shape::wide) abnormal (PATO:0000460) (Rosette leaf::Others)
	fruit (PO:0009001)	abnormal (PATO:0000460) (Silique::Others)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin) abnormal (PATO:0000460) (Stem::Shape::zigzag) abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19246

Determination of introduced cDNA(s)

J023074F05 - Rice Full-length cDNAs - Original: J023074F05

full reading [+] show sequence

GGCTCCTCCT CCTCTCAGAT TAGAAACCCC AGCGAGAGAG AGAGAGAGAG 
AGGGAGAGAG AGAGAGAGAG AGGGAGGTGC GTGAATTGGC GGCCGATCTG 
GCCCGGGGAT GGGGGCAGCG GAGGAGCAGC TGAAGGAGCT CGGGGAGAAG 
CTGGAGGCGG CGCCGCCGGA CCCGGCCGAC GACCTCGCCA AGCTGCTCGA 
GCAAGCTGCA GAATGCCTAC ATGGAGTAGA GCAGTCACCA GGTCCCTCAG 
TGATGGAAAC TATCCAACCA TGTCTAAAGG CTGTTGCCAG AGATGAATTC 
TTGAAACACC ACGATGAAGA TGTCAAAGTA CTATTGGCAA CATGCTTCTG 
TGAAATTACA AGAATAACTG CTCCTGAAGC TCCATACAGT GATGATGTCT 
TAAGGGACAT GTTTCATCTG ATTGTGGATA CATTTAGTGG ACTCAATGAT 
GTTAATGGTA AATCCTTTGG CAGGAGAGTT GCTATTCTGG AAACAGTTGC 
GAGATACCGA GCATGTGTTG TCATGTTAGA CCTTGAATGC AATGATCTAA 
TTGCAGACAT GTTCCGATCT TTTTTAGAAA TTATCAGTGA CAATCATGAG 
CCAAATATTG TAAATTCAAT GCAATCAGTA ATGGCCCTAA TTATAGATGA 
AAGCGAGGAT ATAGAGGAAA GCCTTCTCAA TGTACTTCTA TCAACTTTAG 
GCCGGAAAAA AACTGGTGTT TCTTTGCCTG CACGCAAGCT TGCTCGCCAT 
GTTATAGAGC ACTCTGCAGG AAAACTTGAA CCATACATAA GGAAGATTCT 
GACATCATCC TTGGATGGGG ATGGTACTTC TACCAATAAT AGCATTGACC 
ATCACGAAGT CATATTTGAT TTGTACCAGT GTGCTCCAAA GGTTCTTAAA 
GTGGTGGTAC CTTATATAAC TGGGGAACTG CTGGCAGATG AAGTTGAAAC 
TCGGTCTAAA GCAGTTGAAA TACTTGGCGA ACTTTTCTCT TTACCTGGAA 
TCCCTATCTT GGAATCATTT AAATCTCTTT TCGATGAGTT CCTGAAGAGA 
TTGACTGACC GAGCTGTAGA AATTCGTGTT TCTGTAATTG AGCATTTGAA 
AAAATGTCTG ATGTCAAACC ATTCCCGTCC TGAAGCTCAA GAGATTATCA 
AGGCACTTTG TGACAGATTG TTGGATTATG AGGAAAATGT GAGAAAGCAA 
GTGGTAGCTG CTATTTGTGA TGTAGCTTGC CATTCACTTG GTGCAGTCCC 
AGTTGAAACT ATCAAACAAG TTGCGGAGCG TGTCCGTGAT AAATCAGTTT 
CTGTGAAGTG CTATACCATG GAGAGATTGG CTGACATCTA CAAGTTCTAT 
TGCCAGAGTG GTTCTGATAG CTCAGTAAAT TCTGATGATT TTGAGTGGAT 
TCCTGGAAAA ATATTAAGAT GCCTCTATGA CAAAGATTTT AGACCAGAGT 
CAATTGAATC AATTTTATGT GGTTCATTGT TCCCACCAGA GTATCCAACA 
AAGGAAAGAG TGAAACATTG GGTAACTGCT GTCACACATT TCGACAAAGT 
TGAGATGAAA GCTCTCGAGC AAATTTTTCT GCAAAAACAG AGGCTACAAC 
AAGAAATGCT GAAGTACATG TCCCTTCGAC AGACAAGCCA GGAAGATACC 
CCTGATATGA AAAAAAAGAT CCTGGGGTGT TTCCGGAGCA TGTCTCGTTT 
GTTCAATGAT CATACAAAGT CTGAGGAGTA CTTGAACATG CTTCATCAGA 
TAAAAGATGC CAACATCTGG AATATATTCA CAAGCTTGCT TGATTGTTCA 
ACAACATTCA ACGAAGCTTG GTCTCTTCGG GTTGATTTGC TAACGAAACT 
TGGTGAAAAA CATGCATTAC ATGATTTTGT GAGCACGTTG TCGATGAGAT 
GCTCATATTT ACTTGTGAAC AAGGAATATG TCAAAGAGAT CCTTTCTGAA 
GCTTCTGACC AAAAATCTAC TGGGAATACA AAACTTATGT CATCATGCAT 
GGATCTTTTA ACGGCAGTAT CTAGTTTCTT CCCTTCACTT TTGTCTGGAC 
TTGAAGAAGA TATCATTGAG CTCCTGAAGG AGGATAATGA ACTACTTAAA 
GAGGGTATTG CTCATGTTCT GTCGAAGGCT GGTGGCAACA TTCGTGAACA 
ACTAGCTTCA TCAAGTTCCA TTACTCTTCT ACTAGAGCGG CTATGTTTGG 
AAGGAACACG GAAGCAGGCA AAATACTCTG TTCATGCTTT GGCTGCTATA 
ACAAAAGATG ATGGCCTGAT GTCTCTATCT GTTCTTTACA AGAGGCTTGT 
GGACTTGTTG GAGGAAAAGA AAGTGCATTT GCCATCCATC TTACAATCCT 
TGGGGTGTAT AGCTCAGATA GCAATGCCAA TTTTTGAAAC AAGGGGAGAA 
GAGATAATAA ATTTTATAAC TAAAAAAATT CTTGACTGCA ATGATGATTC 
GGGCGACGTT TCTGCTCATA AATCTGAATG GAGTGATAGT ACTCAAAGTT 
GTTTATTGAA GATTTATGGC ATTAAAACTT TGGTGAAGAG CTGTCAACCT 
TGCAAAGATG CTCAAGCACA TCCGGGAATT GAAAAATTAA TGGGCATCCT 
TAAGAATATC CTTACATATG GTGATATTTC TGCAAATATG ATTTCAAGCA 
CTATTGATAA GGCCCATTTG AGGCTGGCGG CAGCAAAAGC TGTTCTCCGC 
TTATCAAGAC AATGGGACCA CAAAGTGCCT GTTGATGTAT TCTATTTGAC 
TCTCAGGATT TCACAGGATG ATGTTCCTCA GGTGAGGAAA TTATTTCTTA 
GTAAAGTACA TCAATATATT AAGGAAAGGG CCTTGGATGC AAAATATGCT 
TGTGCTTTCT TGTTAGCTAT GGATGATTAT CATGCCCCAC AGTATGAAGA 
GTTTAAGCAC AACATAATTG AGGTTGCGCA GATATGCCAG CAAGTTAAGA 
TGCGCCAACT TTCTGTCCAA GCGGAAACAA ATGTGCTCAC TGCTTATCCA 
GAATATATGA TTTCCTATTT GGTTCATGCC CTCTCTCATG ATCCATCATG 
TCCTAACATT GAAGAGCATG AGGATGTTGA AGCATTTGGT CCAATTTACT 
GGCGATTGCA TCTGCTTCTT TTGATCCTCC TGGGGGAAGA GGGTTTGCAG 
CACAGTGTAC CAGGCATGAA AAAGGAGAGC TTCACAACAA TAGTATCTAT 
ATTTAAAAGT ATCAAATATT CCCAAGATGT GGTTGATGTT AACAAGACCA 
AGACACTGCA TGCTATTTGT GATCTTGGTA TCCTTATTGG AAAGAAATTA 
TGTCAAGAGC AGATAAATAT ATCAGAAGCT CAAACAGTTT CACTGCCCAG 
TCAACTTTAT GCGCCAGTTC AGAAGGATCA GAATGAAAAT TCTGTGGAGA 
GTGATGAGCA GATATGGCCG GGTTGCGAGA ATGTGTTGGC CCATTTTGAG 
GCTCTTATGA CAGCAAAGTC TGCTGAGGTT GAATCTCCCA AGGATAAGAT 
GCTTATAGAT GAGACTGATG AATTTGGTAA TGAAGTTCCT CTAGGAAAAA 
TTGTGAAAAT TTTAAAATCT CAAGGAGCAA AAAAGGCTGG GAGAAAGCAG 
AAGACAAAAT CTGGTTCAAT AAACATGGAA AAAGATGATG ATGTCTTGGG 
ACTGGTTAGA GAAATAAACT TGGACAATCA AGAAAATTTG GGGGAATCAG 
AAAAGAGCAA ACCAAAGAAA AAGCGGATGG ATGCAAAAGA GAGTAATGAC 
AAGCCTGTAG ATTTTTCAAC ACCAAAACGC AAGAGATCAG TTTCTAAGAG 
TAGACCACAT TCAACGAAAG GCAACAAATA CAGTGATGAG CTTCTACTGC 
AGTCTGTTGA CCCAGATGAA ACTATCAACT CATTTGAAAA TAAGGTTGAG 
GGGGCCAAAA AAAGAGATGA CTCGGTTGAT ACTGAGTTGG TAACATCGCC 
TGCTAGTGTT AAAACCCCTG TATCCAAAGG GAAAAAGGGT GCTAAGAAGC 
CCCACGCTGA AATCTTGAGT AGTAGTCCAA AGAAGTCTGA TGAGGCAGGC 
AGTAGTAAGC GAACTGTTGA TTCGGGAAGT TTAAATGGGT CGATCAAAAG 
GCAGAAGCCA AAATTGGTTT CTGGTCTAGC AAAGTGCACA ACACATGACA 
CAGGCAGTGA GGACCTGATT GGAAAGAGAA TAAAAGTTTG GTGGCCGTTG 
GATAAGAAAT TTTATGAAGG TGTTGTGGAA TCTTTTGATT CATCAAAAAG 
AAGACACACG GTGCTATATG ATGATGGAGA TGTTGAAGTG CTTAACCTAG 
CTAAAGAAAA GTGGGAAATT GTTGCAAGTG ATGACCCGCC TGTAAAGGCC 
CGAAAAAAGG ATCATTCAGG GAGAAACCAA GGACGAGCTC AGGATAAAAG 
CATTACCAGC AGCAAGCAAA CTCCGCCGCC TGAACAAGAG AAGTCAAAAA 
AGAGGCCCTC ACCCCCAAAG AGGAAAGGCA AACCAAAAGG ACTGCCGAAA 
AACAAACGCA GAAAGATAGG GGGTAAAAGT TCTGTTGATG CTGCCGGTGA 
TGCGAATATT GATTCGGATT CATCAAGTTC TCTCGCACAC TCAGATTCTG 
ATAATGATAA AAAATCTGAT GGACGCAATG AGAAAGAAGT AGTAGTAGCC 
AAGAAAGCAA AAGCTGAGAA AGTGTCTGGC AAAGGTGATG AGCCAAAAGA 
GGAGGAACCT GATGACCATA ATTTAAACAG CAAGGAGGAA TCTGACAACG 
AGACTCTTAG TGTCTGGAAA AAACGCACAG CTAAAGCAAC ATAGGCTTTG 
CTTTCTCGGT TGATTATTCT TCGTAGGATG CAGATTTCAC GGGCAGCGGA 
TGGGGATGTG GATATCTCAT TTAATTGACC TTGGAATTGA CAGTTGTGAT 
GTAGAAAATG TTCTTTGCAA TAGCAACAGG TTTAGTATAG AAGAGCAGTG 
GAATAGGATT TGCTTCTAAT GTTACTAGAT GCTAGAACTT GTTTCCAACT 
TAATTAGCTA TGGCATTGTG CCCTGGAATT TCATTGTATA CGTATCCTTG 
AGAGGGCCAC AGGTCATGTA ACATATCCGT TTAGCATTAT TTTGCAGGAA 
TAGTGATTAT GTGTTAAAAC TCATGTAGAA ATGTTGTAAA CAATAAACAA 
TGGTTCTTGG ATTGTACTGT ACAACTAGAA TGGGCATCCC AATTTTGGGG 
TGCCTTATTC TGAAGCT

Gene models with high sequence identity

AT5G47690.3 [+] show detail - binding
E-value: 0; Score: 999.99

InterPro Scan Digest

Program	Description	E-value
HMMPanther	ANDROGEN INDUCED INHIBITOR OF PROLIFERATION (	6.2e-189
superfamily	Armadillo-type fold	1.2e-21
superfamily	Tudor/PWWP/MBT	1e-08
Coil	coiled-coil	0

See the detailed result >

AT5G47690.3

Model type: Protein coding
Short Description: binding
Computational Description: binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR