K19415

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19415

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • increased size (PATO:0000586)
    (Rosette leaf::Shape::large)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
petal (PO:0009032)
  • abnormal (PATO:0000460)
    (Flower::Shape::petal)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)
stem internode (PO:0020142)
  • decreased length (PATO:0000574)
    (Stem::Shape::short internode)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19415

Determination of introduced cDNA(s)

  • J033044H03 - Rice Full-length cDNAs - Original: J033044H03

    full reading [+] show sequence

    Nucleotide sequence: J033044H03 - full reading
    GTTCGCGGAA AAAAAATCAG ATCAGGTTCC GCATCCACTC CGCTCCCCGC 
    CCCGGCGAGA GGCTGCAGCT CAGCTCATCG CCGGCGGGCA AGCCCGATCT
    CCCCCAACCT GCTCCGCTCC TTGCGCTCTC CCAATCCCGC ATCTCCTCCT
    CCTCCGACCC CGCGAGGTGG GGGTCGGAGG TCGTCGTCGT CGTCGTCGTT
    GTCGCCTGCC TCCTCTCCGG GCGCTCGCTG AGTTTGCCGG CGGCGTGGGC
    TGTGTGCGGT GTGCGGTGTG CGCGCGCGAT TTGTAGCTGG GAGACGCTTG
    ACTTGTTGCC TCCGCTAGCT CTTCTGGCCT TCGTGTCGAC ATGGCTGCAA
    TGTGATTTGC CGCGCCGCGC GCTGTTCCTC TCTTCTGGAG GGTAAAATGG
    CAGGCAGAGC AAGGTGGGTA GCAAAGTATA CAAAGGGTCT TGTTGATGTG
    CTTCATGAGA ACAATATTTC ACACTACCGT ACCCAGAATG GATGGAGAAC
    CGATGGGTGG AGGAAAATTG TTAGCGAATT CAATGATAGG TACCCAGATG
    CAAAATTTAC TAAAGTTCAA ATTCAGGAGC ATGAGACACA ACTGAAGAGA
    GATTATAGAT TGGTAAAATT AATTCTCCAG CGGGAAGGTG TTACTTGGGA
    TCAAAATGCT TCCATGATTA GAACGACAGA TGAAATCTGG GATGAGATAA
    TTGAGGAGAT GCCCAAGGCG CGGAAGTACC AATTTAAGAG CTTTCCGTTA
    CTTCAATCAC TTGAGGTGTT ATTTGAAGGT GACATTCCTG AAGGGGAACA
    CAACTTAATG CCGAGCAAAC CTCAACTTGC TGGTAGGAAT GTTGATGAGG
    GAGGCAATAA CATGAGCACA GCTCCGAGCA TACCTGGAAG ACCTTGTAGC
    ACAGTTATTG CCGGCATTGA TGATGGGGAG AACAACATCG GCATACTTCA
    GAGAACTCCA GAGTTAGGGC AACAAGGTCT GGATGATGTT GATATTCTGC
    AAAATCCAAC AGAAGAGGTA CTGGAAAGAC CACAGCACGG TGCCGACCCA
    AAACCACAAA GTGCTGATGA ACCGGCGCAC TCAAGCTCTT GCATAGAACC
    TCAAAAGGAC AAGCGAAAGA AGCGTAAGGT CCCTGACATC CAGCAAACCA
    TGGAGGCTTT TCTGGAGTTC AGAATGAAGC AAGCTCGCTT GAAGGAACAA
    GCGAAGAAGG AGAAGAAGGA TGGTGAGCCG TTCTCGATCT CGACGTGTAT
    CAAGGCACTG CATTCAATGA CCGACGTATC TGATCAGGTC AAGATTCTAG
    CCTCTGATGT TTTCAAGGAT GCAGCGAACC GAGAGATCTT CCTTTCCTAC
    GATCTCAGGC TTCGCACGCT GTGGATCAAG AGGGAAGTCA ACAGGTTACT
    CACTTGATCA AGTGGATTGC CGCATCTTGT TGCCCTTCGT CTCCGGAAGA
    TTAGATGAAC GTAGAAACTA TAATTATTAT GGATCAGCTG AAAGTCATGA
    ACTGATCGAT TTGCTAAAAT TATGGATCGG GTCAGATCTG AACCTAGGAG
    TCATGCAAGT CGTCAAGCAC TCGTTTTCCC TATGCTCAGT GCTTAGTGGC
    ATTGGCTGAC TGGACTGCTG CTCCAGCTCC TGCAGCCGGA GGATGGGACA
    CGGCTGCTGC CCCTGCCCCT GGATGGGAAC AAGGCAGTGC ACCAGTCCCA
    GCGGCAGCAC CAACCCCTAA CTGGGGGGAG TGAGTGAAAG AGTAACTGAT
    CCAGTTCATG GGTCAGAGGC TGAGTTTGTT GTCGGGAGCA GCTGGTAGAC
    ACTATTTAAG TAGCTTTAAT CTTTTTACAG TACTGAGTTA TTTAGATGCA
    AATCAAATTT TGTGTTCTTG ACAATGCTGG GACTGCGAAC TAGCCAGCCT
    TTTTTTTGTT ACAATCTCAT GGATAGCTTT ATTTCAAGAG CAATTCTGCT
    TTGCGAACAA AGTGTATGTG TTTGCAACAA CAAATTGATG GGGTTTTCTC
    CTCATAGTTC TTATTGTTCA CTGTCAGACC

    Gene models with high sequence identity

    1. AT2G24960.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-06; Score: 52.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G24960.2

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR