K19437

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19437

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19437

Determination of introduced cDNA(s)

  • J023077C02 - Rice Full-length cDNAs - Original: J023077C02

    full reading [+] show sequence

    Nucleotide sequence: J023077C02 - full reading 
    GACCTCCGCC CGACCTCTGC CCCTCCTCCG AGAGTCCGAG GTCGATCGCC 
    GTCGTCGCTC GGTCGCTCGC TCGCCTGCCT GATCCGGATC CGGCAGGCCG 
    GACTGCGTAG GTGTGCCGCG GCGAGACGTG CGCGCGGCGG CGCCGATCGA 
    CGACCCGATC GATGGACTTC ACCTCGTCCT ACTTCCACGC CTTCGGCAAC 
    CCCGACTTCG CCGCGGTCTT CTCCGGCGGC GGCAGCGCGC AGGCCATCCG 
    GCCGGGCACC ACCACCAGCA GCAGCGGCGG CGCGAAGGCG GTGAACGTTG 
    GCAGGGGCGG CGCGGCGAGG CAGGGCGCCC CGTCCGTGTT CTGCGTCCAG 
    GACGCGGAGG TGGAGGAGGC GCACCACTTC CTCGACGAGT GCACCCTGTG 
    TCGCAAGGGC CTCGCCGGCG ACATCTTCAT GTACAGAGGG GACACGCCGT 
    TCTGCAGCGA GGAGTGCAGG AGGGAGCAGA TCGAGATGGA CAGGAACAGG 
    CACCGCAGGA AGAAGCAGCA GTACTCTCCC ACGGCGCAGG CGGCGGCGCA 
    CCACCACCGA TCAGAGCGCG CGCCCCAGCG TCAGCTGCAG CCGCAGAGGT 
    AGAGATCAAG AGAGAGCTCA GCTCGGCACC ACACCAAGCC GCGCGCCCTT 
    TGCCGGATTG GAGACTCACG CGCGCATGCA TGTTACGCAT GCATGCACAC 
    ACGCGTTCAA CTGGGGTGAT ACTACATATA CAAGTACAGG TGTGTACTAG 
    ACATTTCGAA GAGTCCATGG ATCGATCGAG AGGAACCACC ACCACGACCC 
    CGAGTTCCCA CGTTTGTGGT AGGGAAAACG GTGAAGTAAT TATAGAAGAG 
    TTTTTTTTGT GCATTATGCT TGCTGATGAG CATATATATA TATACAGGTT 
    TGGTTAGAAC AGCATGCTCG TCCAGGCGTC CTGCTCTCGT GTTTGGTCTA 
    TTTACTTCGT ACTGGTTCAG ACCGGGCTGT CAAAAGAAGC CTATGAGCTC 
    TTTTCTAATG TATATTGTAA CGCCCTCTCT ATTC

    Gene models with high sequence identity

    1. AT4G17670.1 [+] show detail - Protein of unknown function (DUF581)
      E-value: 6e-13; Score: 72.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G17670.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF581)
    Computational Description
    Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR