K19509

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19509

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19509

Determination of introduced cDNA(s)

  • J013123G02 - Rice Full-length cDNAs - Original: J013123G02

    full reading [+] show sequence

    Nucleotide sequence: J013123G02 - full reading 
    GAAGGGTACC AGCAGCAACG CCAAGCCAAC AATGGAGGAG ACCTGGCTCT 
    TCCTCCTCTT CTCCATCTCG CTCGTCGCCG TCTTGCTCGC CACCGCTCGC 
    CGCCGCCGCT CTAGCAGCAT CAAGGCGCGC CTCCCTCCCG GGCCGTCGCC 
    GCTGCTCTTC CTCGCCAAGT TCCTCCGCCT CCGCCGCTCC ATCTTCGACC 
    TCGGCCCGCT CCTCCGCGAC CTGCACGCGC GCCACGGCCC CGTCATCTCC 
    ATCCGCCTCT TCGGCACCAC CCTCGTCTTC GTCGCCGACC GCCGCCTCGC 
    CCACCGCGCA CTCGTCCAGG GCGGCTCCAC CTTCGCCGAC CGCCCGCCGC 
    TCCCGGAGCT CGGCCGCCTC TTCACCTCCG ACACCCGCGA CATCAACTCC 
    TCCCCGTACG GCCCCTACTG GCGCCTCGTC CGCCGCAACC TCGCCTCCGA 
    GGCGCTCAGC CCGGCCCGCG TCGCGCTCTT CGCGCCGGCG AGGCGGCGCG 
    CGCGCGACGT GCTCGTCCGC GGCCTCCGCG ACCGCGGCGG CGACGGCTCC 
    CGGCCCGTCG AGCTGAGGCC GTTGCTCCGG CGCGCCATGT TCGAGCTGCT 
    CCTGTACATG AGCCTCGGCG CCAGGCTTGC CCCGGAGGCG CTCGAGGAGG 
    TCGAGCGGCT GGAGCTATGG ATGCTCCGCG CCTTCACCAG CTTCCCCGTC 
    TTCTCCTTCT TCCCGGCGAT CACCAAGAGG CTCTTCCGCA ACCAGTGGGC 
    CGCTCACGTG GCCGTTCGCC GGAGGGTGGG CGAGATATAC GTCCCGCTGA 
    TCAACGCCAG GCGCGCCGGA GACGGAGACG GCGACGACCC ACCCTGCTAC 
    ACGGACTCCC TCCTCCAGCT GCGCGTGGCC GAGGAAGGCG ACCGGCCGCT 
    GACGGACGAC GAGATCATCG CGCTCTGCTC CGAGTTCCTC AACGCCGGCA 
    CCGACACGAC GGTGACGTTG GTGGAGTGGA TCATGGCCGA GCTTGTGAAC 
    CGCCCCGACA TCCAGGCCAA GGTCCACGAC GAGGTGAGAC GCCGGCCGGA 
    GCTAACCGAG GCAGACCTGC AGGCGATGCC GTACCTCAAG GCCGTGGTGC 
    TGGAGGGCCT CCGGCTGCAC CCGCCGGCGC AGTTCCTGCT GCCGCACGGC 
    GTGCAGAGCG ACGCGGAGGT CGGCGGCTAC GTGGTGCCCA GGGGCGCGGA 
    GCTGAACGTG TGGGTGGCGG AGTTGGGGCG GGACGAGGTG GTGTGGACGG 
    CGGCGAGGGA GTTCATGCCG GAGAGGTTCA TGGACGGCGG CGAGGTGGAG 
    GTGGACGTGA CGGGGAGCAG GGAGATAACG ATGATGCCGT TCGGCGTGGG 
    GCGGCGGATG TGCCCCGGGT ACACGGTGGG GACGCTGCAC GCGGAGTACC 
    TGGTGGGGAG CCTGGTGAGG GAGCTGGAGT GGCTGCCGGA GACGGAGGGG 
    GAGGCGGCGG ACATGGCGGA GGAGCTGGAT TTCACCACCG TCATGAAGCA 
    CCCGCTCCGT GCTCGCGTCC TCCCAAGGCC CTCCTCCCTC TACTAATCGT 
    GCTTCCATGG ATGAATCATG CATGAAGAAT AACATGCCAA TCGATAGTTT 
    TGTGATGGTT GTAAAAGCAT GTGTAGTTTT ATGATACGTA CTTTATGTTT 
    AAATATGTGT AATACTGTTG ATTTTTGAAA TAATATTTCA TCATTGTCTT

    Gene models with high sequence identity

    1. AT1G64950.1 [+] show detail - cytochrome P450, family 89, subfamily A, polypeptide 5
      E-value: 3e-101; Score: 366.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther CYTOCHROME P450 SUBFAMILY 79A 8.7e-159
    HMMPanther Cytochrome P450 8.7e-159
    PatternScan Cytochrome P450, conserved site 0
    Coil coiled-coil 0
    HMMPfam Cytochrome P450 2.1e-74
    Gene3D Cytochrome P450 1.2e-96
    superfamily Cytochrome P450 2.4e-105
    FPrintScan Cytochrome P450, E-class, group I 1.2e-28
    FPrintScan Cytochrome P450, E-class, group I 1.2e-28
    FPrintScan Cytochrome P450, E-class, group I 1.2e-28
    FPrintScan Cytochrome P450, E-class, group I 1.2e-28
    FPrintScan Cytochrome P450, E-class, group I 1.2e-28
    FPrintScan Cytochrome P450, E-class, group I 1.2e-28
    FPrintScan Cytochrome P450, E-class, group I 1.2e-28
    FPrintScan Cytochrome P450, E-class, group I 1.2e-28
    FPrintScan Cytochrome P450, C-terminal 0.0000000034
    FPrintScan Cytochrome P450, C-terminal 0.0000000034
    FPrintScan Cytochrome P450, C-terminal 0.0000000034

    See the detailed result >

    AT1G64950.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 89, subfamily A, polypeptide 5
    Curator Summary
    member of CYP89A
    Computational Description
    "cytochrome P450, family 89, subfamily A, polypeptide 5" (CYP89A5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 87, subfamily A, polypeptide 6 (TAIR:AT1G64940.1); Has 33837 Blast hits to 33688 proteins in 1718 species: Archae - 63; Bacteria - 4127; Metazoa - 11783; Fungi - 7185; Plants - 9256; Viruses - 3; Other Eukaryotes - 1420 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR