K19514

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19514

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
rosette leaf (PO:0000014)
  • increased size (PATO:0000586)
    (Rosette leaf::Shape::large)
  • increased length (PATO:0000573)
    (Rosette leaf::Shape::long)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19514

Determination of introduced cDNA(s)

  • J023103B06 - Rice Full-length cDNAs - Original: J023103B06

    full reading [+] show sequence

    Nucleotide sequence: J023103B06 - full reading 
    GCGAGGAAGA AGAGAAGAGA GAAGGGGAGG AGGAAGAAAT GGCTGCCGTC 
    CAAGCAGCAA TCTCCACCTG CTGCTCTTCG TCTTGCCTGT CCCGGCCGCC 
    ACCGCCGTTC GCGAGGAGGC GGCGCTTCAA GGTCACGGCC ATGGCTCCCC 
    AGAAGAAGGT GAACAGGTAC GACGAGAAGT GGTCGAAGCA GTGGTTCGGG 
    GCGGGGATAT TCGCGGAGGG GAGCGAGGAG GTGGAGGTGG ACGTGTTCAA 
    GAAGCTGGAG AGGCGGAAGG TGCTGAGCAC GGTGGAGAAG GCCGGGCTGC 
    TGTCCAGGGC GGAGGAGCTC GGCGTCACGC TCTCCTCGCT CGAGGAGCTC 
    GGCCTCCTCT CCAAGGCCGA GGACCTCGGC CTCCTCAGCC TCGTCGAGGC 
    CGCCGCCGCC GCCTCCCCCG ACGCCCTCGC CTCCGTCTCG CTCCCGCTCC 
    TCGTCGCCGC CATCGCCGCC GTCGTCCTCG TCCCCGACGA CTCCGCCGCC 
    CTCGTCGCGC TCCAGGCCGT CCTCGCCGCC GTCCTCCTCG CCGCCGCCGC 
    CGGCCTCTTC GTCGGCTCCG TCGTCCTCGC CGGCCTGCAG GAGTCCGACT 
    GATCGTCGCC GCAGGGTTTG ATGATCACTA GGACATGTAC GTATTAATCA 
    CCGTATTTAT ACAGTGCTTA GTGTGTTACT AGTATC

    Gene models with high sequence identity

    1. AT1G74730.1 [+] show detail - Protein of unknown function (DUF1118)
      E-value: 1e-23; Score: 106.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G74730.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF1118)
    Computational Description
    Protein of unknown function (DUF1118); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1118) (TAIR:AT5G08050.1); Has 78 Blast hits to 78 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR