K19623

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19623

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
T2  
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Original: K19623

Determination of introduced cDNA(s)

  • J033091G14 - Rice Full-length cDNAs - Original: J033091G14

    full reading [+] show sequence

    Nucleotide sequence: J033091G14 - full reading 
    GACTACCGCC ATCGATCTTC TTTCTCTTCC CCAGCTCGAC CACGACCACT 
    CCCGGGAGGG AGAGGGAGAG GGAGAGCAGC AGCAGCGGTA GCCAGTTAGT 
    CCAGCTGATG CCGCCGAAGC GGCGGCCGGA GGAGGAGTCG CCGCAGGCGG 
    CGGCGCTGAA GAAGCGGTGC CGGTCGTTCG ACCTAGAGAT CAGGGGTTGC 
    AGGCACCTGC AGGAGCTCGC CGCCGGCTGC GTCCGCACGC TCGAGGCCGC 
    GCTCGAGTCC GCCATTAGCC GGATTCCAGA GGAGGTGACA AAAGCACTTA 
    CAAGCTTCCT AATCCGTGCT CCTAGAACAC TGTCTGATCA GAACCAGCCT 
    CCAAGGTACA AGCTTAGGTT CTCAAATGGC TTGAGCAATG AAGTTTTCAC 
    AAAGAAAGGA ATCTGTGATG TTAATGGAGA GTCTCTCAAG ATATCTGTGC 
    ATGTAAACAA CCCACAAGAG GCCTGCTCGC ATCGCCTTCT TTCTGCTAAG 
    ATCAGAGTTG TTGTTCTTGA TGGTGACTTC AACAAGAATG ATCAGGGGTG 
    CTGGACATCA GAGGAGTTCA GAAACCACAT AGTGCGCCCA CGTGATAAAG 
    TTGGGACTGT GCTGACTGGA GAGCTTGAGC TTAGCCTGAA AAATGGAGAG 
    GCTTACATCC ATGATGCCAC TTTTGTTGAT AACTCCAAGT TCATGAGGAG 
    TGGTAAGTTC AGACTTGGGG TAATGGTTAT TGATGATCTC GGTGAACGTA 
    TTCAGGAAGG CATAACTGAA CCTTTCGTTG TGAAGGATCG TCGCGGAGAA 
    GGTTCCAAAA AGCATGAAAT TCCATCATTG GATGATGATG TCTGGCGCCT 
    GAAGAAGATA TCAAAAGATG GTGTCTTCCA TGATGCATTG AAACAGAGTG 
    GCATTTCAAA CGTGAAGGAA TTCCTTAGGC TGTACTATAC TGATGAGCCA 
    GCTCTGCGCA AAATTCTTAT TAAGGCCACT GATAAAGTTT GGACGACTAT 
    CATTGAGCAT GCTAAGAAGT GTGATCCTGG AAGAGAGCTG TACTCTTTCT 
    TGCCGGAAAA CCGCAATGTT GTGCTGTTCT TCAACTCTAT CCATCAGATT 
    GTTGGGGTGA TAACTGGTGA CCATTACACT CCCTTCAGTG ATCTTGACAA 
    GCCTATGCAG GATGATGTAG GACAACTGAG CAAATTAGCA TATGCAGATT 
    TGAACCACTT CCTACCTGAT TTTGAAATGA AAAATGGCAA ACCAAGACAA 
    ATCAACCAAT GCGCTTTCCA AGAATCGAGA ATGGTGGAGC CTAAATTTAC 
    TGACCAAATC CAAGGACATA TGGATCCTAA TTTTGCTGGC CTTATACAAG 
    GAAATATGGA TCAAAAGAAG AGAAATGTCC ATGAATCTGA TGATCAGCAA 
    GGAACTTCTG GCAGTCATCC CAGGCAGTGC AAATTATCAA GGTTTGGATC 
    TGTGCGAGTG ACACACGTGG CATCCTTGAA CAAAAACGAT GAAGATTCTT 
    TGGACTTCAG TTTCCTCCTG AATTCTCTAT CTGACCAACA TGATGCAAGC 
    ATGAACACAA ATGAGATAGC AGCCTCGGTG ACATTCCATT GTCCAACCGC 
    TTCTACAAAT GAAATTACTG GATCAGTGGT GATGAGGCAA GCATCTTTCA 
    GAATAGATCA TCCAGCTTGT GAAAATGATG CTTCAGTTGC TGAATTCCAC 
    CAAGAGCAAC AGGTGGTTAC CGCACAATTT GATCCATCTT TTTTAGCTGT 
    ACTCGCTGAT GCCCCCATGT ACTCAACGCA CAACAGCTTC AAAGAGAGTG 
    AATGCCACGA GGCGCTACAA AAGCTGTCTG AAGACTGATT TCCCTAAGAA 
    CAATGAACAT TCATTTTGAT GCATATTTAG GTCAAGTACT GTTTTGAGTC 
    TCATTTTCTT AATATGCCAG CTTGGTATTA GTGATTGCTT CTATTTAATT 
    TGTAATGTGC TCATATTCTT GTACTATTTA CTGGATCATT ATTATTTAGT 
    TACAAGAACT TTGGCTCTGT GCATGCTAGA TGCAGAGGCC GGGGATGTAA 
    TTCATCTTCC TTATTAAAAA CAATAAATAT TGTGTCT

    Gene models with high sequence identity

    1. AT5G57580.1 [+] show detail - Calmodulin-binding protein
      E-value: 4e-54; Score: 209.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G57580.1

    Model type
    Protein coding
    Short Description
    Calmodulin-binding protein
    Computational Description
    Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2); Has 341 Blast hits to 322 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR