K19936

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K19936

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K19936

Determination of introduced cDNA(s)

  • J033060O15 - Rice Full-length cDNAs - Original: J033060O15

    full reading [+] show sequence

    Nucleotide sequence: J033060O15 - full reading
    GAGTCTCGAG AGGGGCGGTC CATCCACGTG AGGAGGACAC AGTTGCAAAT 
    TTCCAAATCC AAACCCTCGT CGGCGTCGTC ACCGTGGCGG CGACGGCGGC
    GGCGGCGGCG ATGGTGCCCG CCGGGGGCGG GGGAGGGGAG CTGGAGAGGA
    GGGTGATGGC GGCGCTGAAG GCGTCGGAGG CGCGTGGGGA CCAGCCGCTG
    GTGTGGGCGG TGGAGGTGGC CCGCGTCGTC GCCGGGGAGG GGGCGGGGCT
    CCCCAGCGCG GACCTCGCCG GGATCCTCGT CTCCAACCTC TGCTTCGCGC
    ACAACTCCCC CTCGCTGTGG AAGCTCGTCG GCCACGCCGT GGCCTCCCGC
    CTCCTCTGCC CGCTCCACGT CCTCGCGCTC CTCACCCCGA GGGTGCTGCC
    GCAGCGGCGG GCGCAGCCTG AGGCGTACCG GCTCTACCTG GAGTTGCTGA
    GAAGTAACGT CACATCCTCC TTTCTCTCCA TGGAGGCCGG GCCTAATCGA
    GACAAGATAA CAAAGTCCAT CGATGATGCT TTGCAACTGT CAAAGATTTA
    TGGATTTTCT GGAATCGACA ATGGACATGT CATCATTTTC TTTATGATGT
    TTGTAATCAC CAAACTGATC GATTGCACAC TTGAAGACTG TGGCTTTCCA
    TCCGGGCTGA CAGAGGAGCA GGGGAGCATT TACGCTATTG AAGGGCCACA
    GGATATGGAC TTAGATGTCA AAGGGGTTTC AACTGAGAAG CAAAACGAGC
    ACCGTGCACA ACTACGCCGG AAGAACACTG TTATGGCTTT AGATGTGTTG
    ATTATGGTGG TTGCTGATAG GAAGATCCAA TCATTTCTGC GCTTGATATT
    CCTGAACATG CCTGAAAAGT TCAGTGTGTT AAGCCAGAGG TTGAGCTTGG
    TTGAAGCTCA CAAAATGGAA TTGGAGACAC TATTGACTGC TAATCATAAA
    ATTGATGATC TGTTGATGAA TATGTGGAGG GTTAGCAATA CAGCCTATCA
    ACCAAACAAC AAAAGGCTTT TGGGTGTTCT TGGTAACATG AAATATGGTG
    GCTCCATGCT GGGCCAGTTT ACTGGAGCTG GGAGAGCTGC ATGCTGGGTT
    ATATTTGACA TATATGTTGA GAATGCAATT GATGGAAAAC ATCTAAGCGC
    CATATCTGCT ATCGAGGTTC TGAAAGAAAT GACCAAGACA CTCCAAGCAA
    TTAATGAGGC GAGTTGGCAG GAAACCTTTA AAGCTCTTTG GATTTCTGCC
    CTTCGCCTTG TACAGCGGGC TAGAGAACCT CTCGAAGGAC CAATTCCTCA
    TCTAGATTCA AGACTATGCA TGCTATTAGC TCTTATTCCA TTATCAATTG
    GTGCAATTCT TAAAGAAGAA ACTGATGTCC ATGGAGCTCA AGGAAGCAAA
    AGTCTTCCAA AAACATCAGG ACTTGTATCA TCACTCCAGG ATTTGATCCA
    GTATTCAGGA CTTCTAGTAC CTCCTTCATC AGTGGTAAAT GCAGCCAATG
    CTGCAGCCTC AAAAGCAGCA GCATTTAAGG CCAACTATAA GTCTGGAGGT
    GGCAACCCTG GCATGATGGG CCAAAATGAC TCTTCGACAA AAACTGTTGG
    GAATATGCTA CATCTTATAG TTGAAGCCTG TATTTCAAGG AATTTGATTG
    ATACATCTTC TTACTTATGG CCCGGCTATG TTGTATCATC TGGGCATTTG
    AAAGGTGCGA CATTACCCCA AGGATCCCCC TGGTTAAACT TTATGCAAGG
    AGCACCACTT TCAGGTCCAC TTATTGATGC TCTGATTGCT ACTCCTGCTT
    CAAGCACCAC AGAATTGGAT AGGTTATATC ACATAGCATT AAATGGTTCA
    GAGGAGGAAA AATCAGCTGC TGCAAAAATT CTTTGTGGTG CTTCATTTGT
    TTGTGGTTGG AATATCCAGG AATATGTGGT CCGCACGGTG GTCAAGCTAT
    TATCACCTCC ATTGCCCTCA AATTCCTCAA CACAGGGCAG CATGAGCCAC
    TACCTTGCTC AGATGTCTAC ATTAAATGCA CTCTTGCTTG GTATTTCTTA
    TGGTGATGCT ATCCACATTA TTTCTTTGTA TGGAATGGTT CCAGATGTTG
    CTGCAGCTTT AATGCCAATC TGTGAAGTTT TTGGGTCCAT ACCACCTCCA
    TCTAACCACA AGCCTGCCAT TGTTGGTGAA ATATCAGTTT ATTCGGTCTT
    CTCTTGTGCA TTTCTTTGTC TTCTTCGACT GTGGAAATTT TATAAACCCC
    CACAAGAATA CTGTCTAGCT GGACGTGGAG GCTCAGTTAG ATTGGAGCTT
    ACTCTGGACT ACCTGCTGTT AATGCGCAAT AACCATATTG ACTTTGCAAA
    TTCATCTGCC AGTAGTAGAA ACTCTAGCAA CAACATAGGT CCATTAAATG
    AGGTTCCTGC TCAACCACTT TATATTGATT CTTTCCCCAA GTTAAGGGCT
    TGGTATTTTC AGAATCAAGC TTGCATAGCT TCAACCCTTT CTGGTCTTTG
    CAACAAAAAT CCTGTTCATC AAGTTGCAAA CAAGATTTTG AGTATGATTT
    GCAGAAAAAT GAACAAACCT GTTGTATCAT CTGGCAATCT TTCATCCACT
    TCTAGCAGTA GTGTCAGTGG TTCCTCTGTA AGTACACCAG ATGATTACCA
    AAGGCCAACA GTTCCTGCAT GGGAATTTTT AGAAGCTGTT CCTTTTGTTC
    TTGAAGCTGT TCTTACAGCA TGTGCTCATG GACGGTTTTC CAGCCGAGAC
    TTGACTACAA GTTTGAGAGA TCTTGTGGAC TTCTTGCCAG CTTCTATTGC
    AGCAATTGTT AGCTACTTCT TAGCAGAAAT TACACGAGGA ATCTGGAAAA
    TGGTCCCGAT GAATGGAACT GAATGGCCTA GTCCTGGTGC TTCTCTTCAT
    TCCATCGAAG CAGAAATAAA GGAAATTCTC GCATCTGCTG GCATTCAGAT
    TCCCAGCTGC TATCCACGTG GTGTACCACC AATGCTTCCT TTACCAATGG
    CTGCGCTGGT CAGCTTAACA ATTACATTTA AGCTTGATAA GAGTTCAGAG
    TATATCCATG CGATCAGTGG CCAGGCACTA GAGAACTGCG CAGGGGGCAG
    TTCCTGGCCA AGTATGCCCA TCATAGCAGC CTTATGGACA CAGAAAGTCA
    GAAGATGGCA TGACTTTATC ATCCTCTCTT GTCTGCGTTC TCCATTCGGC
    AGAGATAAAG ATGCAGTTGC ACAGCTCATC CAAAGTTGCT TCTCATCCTT
    TCTACGGTCC TCGTGCAGTG GGTCTGACTT TACTGCAAAC CGTGGAGTTG
    GTGCCTTAAT GGGAGATGCA ATCACCGGCC AAGGTCTTCA GCTTCCCATG
    GCTCCTGGTT TCATTTACCT GAGAACTTGT CGAACATTCC ATGACACCTA
    CTTTGTGAGT GAGGTAATCC TGAAGCAAGT CATTGAGTGG GCTGACAAAC
    TTGCAAATGG ATTCTCTTCC AGTGGCCCTC CACAGTTAAA ATCAGGACGC
    ACGCCACTAT CCAGCGCTGC ATGTATGGCG CATCAAGTTG CGATGCTTGG
    TGGGGGACTC CTGTGTGTTG CAGGTGGACC TCTTCTGGTC CAGGTATTGT
    ATGAGGAGAC CTTGCCTACG CTGCTGCTAT CAGCTCGAGA AGAGAGTATG
    AAAGACCCTG GACCAGTTTC AAGCACACTC CAAGGTTACG CCATGGCCAA
    CATGCTCTTC TTCTGTGGTA GTCTGCTCTG GGGAGCGGAA AGAACTTCTC
    CTGTCATGAA ATTGTCTTTC CTGTCAAGAA GGCCACGAGT GGTGGGAAAC
    CATATGGATT TCATGGCGGG TGTATTGGAT GGGCACATTC TTCTGGGTTG
    TGACCATGGC ACCTGGAAGG CATATGTATC GCGCTTTGTG TTCCTGGTGG
    TGAAGTTTGT CCCGTCATGG TTGCGGGACA TTAAACTGGA CACGCTAAAG
    AAGATAGCGT CTGGGCTTCG GAGTTGGAAT GAGCACGATC TTGCATTGGC
    TTTACTTGAG CGAGGAGGAC CTCAGGCAAT CTCCACTGTA GTCGACACCT
    TGTTGTGATC TTTGCCTCTT GACATTTCCC ACCCATTATC TGACATAGGA
    GTTTTTGTAA TCACATTTGA GGCCAGGACT TGTGTAGAGA TGTCTTCTGG
    TTCAGGATTT CTCAGTCGAG CTATCTAAAA TTTCTGAATT CTGTCAGCGG
    AGAGATGCTA GCTAATCTTG TTTGCTGGGT GCATTGCTAA CGTTGCTATT
    TTCAGGGTAG CATTGTGAAC CCAAAATCAT ACAGAGGCCT TGCTCGACAA
    CGTATCCAGT TAGAACTTTC TGATCTGTCT ATGTACATTT CTGTAGGTAG
    TATATTTGTG TGGTCTGTAA AACTGCAGTG GTAGCTGTAT CTCAACATAT
    GCTTATTTTC GACAAAATTT AAACCAAGGT AGCATCAGTC C

    Gene models with high sequence identity

    1. AT3G23590.1 [+] show detail - REF4-related 1
      E-value: 0; Score: 792.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G23590.1

    Model type
    Protein coding
    Short Description
    REF4-related 1
    Computational Description
    REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR