K20030

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20030

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
cauline leaf (PO:0000013)
  • present in fewer numbers in organism (PATO:0001997)
    (Cauline leaf::Number::few)
rosette leaf (PO:0000014)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20030

Determination of introduced cDNA(s)

  • J033092L14 - Rice Full-length cDNAs - Original: J033092L14

    full reading [+] show sequence

    Nucleotide sequence: J033092L14 - full reading
    GGCAGTTGGA AAGCATTCAG TGCTCTTCTC TCTCTCCTTC TCCTTCACTT 
    TCTCTCTCCT CTTCTTCATG CTCGGATTTC CCTCTCTCGC GCATCGATCC
    GTCGCCTCGG CGCACAATTC GGGCTCGGAA TCGGGTCCCT GATCCGCGAC
    ACCGCCCGGC TCGATCGTTT CCCGGGCTGA TTCGGTGGCC ATTGCGGCGA
    GATCGGAGCA GGGAGAGATC AGGGCAGAGA ATCAGCATGA TGATGGAGAC
    TGAGCTATGC TCCTCCCGGG TTCTGTCTCC GCCTCGGTAC GAGAGTGGCG
    ATGAGGAGCT CTCGGTGCTT CCTCGGCACA CGAAGGTCAT CGTCACTGGG
    AACAACCGAA CAAAGTCCGT CTTGGTTGGC CTACAAGGTG TTGTCAAGAA
    GGCTGTTGGT CTTGGAGGTT GGCACTGGCT GGTTCTAAAG AATGGTGTAG
    AGGTGAAGCT GCAAAGGAAT GCTTTGAGTG TATTGGAACC TCCAACTGGT
    AACGAAGACG ATGATGATAT TGATGGCAAC AATTCGTTCT GTAGCAGTTC
    CGACATGGGA GACAAAGACA TGGACTATTC GAGCATAGAG TACCACAAAC
    CAACAAAGCC AAGAGTTCGG CATACAAGGC CCTGGTCTTC CTGTATAAAA
    TCCAGCAACC GAGGCAATTT TCACCCCAGT ACAAAGCTGC GAACGAGAGT
    AAACCTGACA AAACTTGGAA CTCCTACGCT GTGGAGATAC TGGAAGCATT
    TCAATCTTGT AAGCATGAAC CCCAATCCAT CAAAGGAACA GCTCTTCCAT
    GGGGTCCAGC AGCATTTTCA GTCTCAGCAA TTGGATGAGT TGCAGGTGAT
    TCTGGGCTTC ATCCAGGCAG CAAAGAGGCT CAAGACCCTG TACCGCTCCT
    AGCCTGCTTC ACAAAACCCT CAGTGTGTAG ATCTCAAGAA ATTAGATGTT
    GTTCCTATGT GGTTAAAATT AATCTAGTCT TGAGAGAGAT GAACAGAAAA
    GAAGATAATT AGAGGTGCAT TTGATGAGTA ATTCTTTTTA CTTTTTACCT
    GTAATTGAGT TTATGTAACC CCAAGTTCAC ACAGTGTCAG CAACTGACCA
    ATCTCAATTA TTGGATGGAG

    Gene models with high sequence identity

    1. AT1G19330.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-58; Score: 223.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G19330.2

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR