K20036

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20036

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) increased width (PATO:0000600) (Rosette leaf::Shape::wide)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin) desaturated green (PATO:0001272) (Stem::Color::pale) abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20036

Determination of introduced cDNA(s)

J023015A14 - Rice Full-length cDNAs - Original: J023015A14

full reading [+] show sequence

GTTTATTCTT TTGTATTTAA AACTTATTTT GACCATATGT TTGGTTATAG 
TTATGACCAC TAGATTGTTA AGAGCAATAT TTATTTTAGC AGCTTCATGT 
AATGTAAAAA AATATTTGGA TGACAGTTAT CGTAGAAGTA AGCAATAGAA 
TTAACCATTT TTGTCGGCTA CATTGCTTTT CCTTTCATTT TGGTACTACA 
ACATGAGCTA GGGCCTAGGA GATGGTGCAT ATGGATGTTG AATCAAACTC 
TTTGAATGTA ATGCTGGTAT GATTGTTCAC CCAGAAATTT GAACTTTGGG 
CTTACAAGAA ACAGTTATTG TCTTTTTGTA TTTGTGATTT TGTAGAGACC 
AGAAATTTCC CAAGATAGTG ATATTTTACT GAGTAGCCCA GCATGTTTGC 
GCGTTGTAAC TCTTATTGGG CTAATTCTTT CTTATATCAT ACTTGTTGTC 
AAAGTTTTGA CTAGGGTCGT ATTATTTTGT GAGACTGTTT CTTATGTAGG 
TCATTGGTGC AGTTGGTTTC ATGAACCACA GGTTGGAGAT TCCTAGTGAA 
ACAGATCCTC AGTGGACATC ACTTATCCTG AGTTGTTGGG AAACTGACTC 
ACAACTCCGT CCATCGTTCC AACAACTTCT GGAGAGACTT CGAGAGCTGC 
AAAGGCAGTA CAATGTCCAG ACTCAGATGC AGCGAAATGC ATCCGCTGCT 
GCAAAAAATA GCAGCATTGA GGAATGAATG GAGATCCCTT ATGAGGCGAA 
CGATCAATTG ACACAATTTT GCAGGCGGTG CAGCGACACG CTAGCCTGAT 
CAGGATTCGC ACCTCCCGCG TGGTTACTGC TGATGATGCT GATTGATACA 
GCCATTGCTG AAGATTGAGC AAGACGAGGG AGCTGCCTCC TGAATCCTCT 
TGGCCTGAAG TTCCACCTGC AGCTTCGGAA TTCTGACCAA GGTAGAGAGT 
ACTGGAGCTG AGGCTGGCAC TTTTGGTGAA TTCTTCCATG ACAACTCCAA 
TTTATGCCTA GTCGAATGTC GACCAAGCTC GACTCTGTAA CGCGAAGGCG 
ACAATGATCT TGTGTAGATT GTTCTGACGA TCGACAACCA AATTGTATTC 
GAGTTGCTGA TCCTGATTAT GCATGAAAGT TGCACCATCA ACATTGTAAG 
GTTCAACCTG TTCTTTTGTT CTGCTCTGAT TCCTTCTCTG TTACTGTAAC 
CATGTTGTTT AGAATCCCAT CAGAACCCAA TCATTCTTGC TACTTCGACC 
ATGGATGGAA GAAATATGGA ATTGTGCCTT CAATTTCACA TTATTCAAAC 
TTTGGCTGCA AATAATTTAA ATGTCATCTA AGAAATACCC AGTAGCATTA 
TTAGATTTGA CATCTGTTTT TAAGTTTTAA CACGAATTTA TTCATAAAGA 
TTGAAGTT

Gene models with high sequence identity

AT1G67890.1 [+] show detail - PAS domain-containing protein tyrosine kinase family protein
E-value: 7e-13; Score: 72.40

InterPro Scan Digest

Program	Description	E-value
HMMPanther	PTHR23257	6.90001478563499e-26
HMMPfam	Serine-threonine/tyrosine-protein kinase	0.0095
HMMPanther	PTHR23257:SF80	6.90001478563499e-26

See the detailed result >

AT1G67890.1

Model type: Protein coding
Short Description: PAS domain-containing protein tyrosine kinase family protein
Computational Description: PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 128751 Blast hits to 126912 proteins in 4876 species: Archae - 309; Bacteria - 16105; Metazoa - 47584; Fungi - 11405; Plants - 33369; Viruses - 523; Other Eukaryotes - 19456 (source: NCBI BLink).
Link: InterPro Scan - TAIR