K20139

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20139

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20139

Determination of introduced cDNA(s)

J033086I12 - Rice Full-length cDNAs - Original: J033086I12

full reading [+] show sequence

GACGGTTGAT CGATCAGTAC GAGTACGACG AGAGCTAAGT AAACTTAGCT 
ATATCGATCG ACCATGGCGT CCAGGACTAG TGCTACTGCC GGCATGCTGC 
TGCTCGCCGC CGCGGCTGCG CTGGTGTGCA GCTCGGCGGC GGCGAGGATG 
CCGCCGTTGG CGAAGGGGTT GTCGTTGGGC TACTACGACG CGAGTTGCCC 
GCAGGCGGAG GCCGTCGTGT TCGAGTTCCT GCAGGACGCC ATCGCCAAGG 
ACGTCGGCCT CGCCGCGGCG CTGATCCGGC TCCACTTCCA CGACTGCTTC 
GTCCAGGGCT GCGACGCCTC CATCCTGCTC GACAGCACAC CCACCGAGAA 
GAGCGAGAAG TTGGCGCCGC CGAACAAGAC CCTCCGCAAG TCGGCGTTCG 
ACGCCATCGA CGATCTCCGC GACCTGCTCG ACAGGGAATG CGGCGACACC 
GTCGTGTCCT GCTCCGACAT CGTCACCCTC GCCGCCCGCG ACTCCGTCCT 
CCTCGCCGGT GGCCCGTGGT ACGATGTTCC CCTCGGCCGC CACGACGGCT 
CCAGTTTCGC GTCTGAGGAC GCCGTCCTGA GCGCGCTCCC GTCGCCGGAC 
TCCAACGTCA CCACGCTCCT CGAAGCGCTG GGCAAGCTCA AGCTCGACGC 
CCACGACCTC GTCGCCCTCT CCGGCGCGCA CACCGTCGGC ATCGCGCACT 
GCACTTCCTT CGACAAGCGC CTCTTCCCTC AAGTCGACCC CACCATGGAC 
AAGTGGTTCG CCGGCCACCT CAAGGTCACC TGCCCGGTGC TGAACACCAA 
CGACACCACC GTCAACGACA TCCGGACGCC CAACACCTTC GACAACAAGT 
ACTACGTCGA CCTGCAAAAC CGCCAGGGCC TCTTCACCTC CGACCAGGGC 
CTCTTCTTCA ACGCAACCAC CAAGCCGATC GTCACCAAGT TCGCCGTCGA 
CCAGTCGGCC TTCTTCGACC AGTACGTCTA CTCCGTCGTC AAGATGGGCA 
TGATCGAGGT GCTCACCGGC TCGCAGGGGC AGATCCGCAA GCGCTGTTCG 
GTGTCCAACG CCGCCGCCGC CGGCGACCGT GCTTGGTCCG TCGTGGAGAC 
CGTCGCTGAG GCCGCCGAGA GCTTGGTGCT GTAGGGTGCT AACAAGGATG 
GCTAGTTTAA TTAAGCTTAT TTCCTTGATA AATATTTTGT TGCTTCCAAA 
TGTCATGAGT ATGTACACTT GCGTGTATTT TGTAGCTTAT TTTTTATTTG 
CAAATAAAGT TGAATATATG AAAACTATTT AAATCC

Gene models with high sequence identity

AT1G71695.1 [+] show detail - Peroxidase superfamily protein
E-value: 3e-91; Score: 332.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Haem peroxidase	3.1e-105
PatternScan	Peroxidases heam-ligand binding site	0
PatternScan	Peroxidase, active site	0
HMMPfam	Haem peroxidase, plant/fungal/bacterial	7.8e-70
Gene3D	no description	2.9e-50
ProfileScan	Haem peroxidase, plant/fungal/bacterial	68.715
FPrintScan	Plant peroxidase	1.4e-51
FPrintScan	Plant peroxidase	1.4e-51
FPrintScan	Plant peroxidase	1.4e-51
FPrintScan	Plant peroxidase	1.4e-51
FPrintScan	Plant peroxidase	1.4e-51
FPrintScan	Plant peroxidase	1.4e-51
FPrintScan	Plant peroxidase	1.4e-51
FPrintScan	Plant peroxidase	1.4e-51
FPrintScan	Plant peroxidase	1.4e-51
FPrintScan	Haem peroxidase, plant/fungal/bacterial	6e-33
FPrintScan	Haem peroxidase, plant/fungal/bacterial	6e-33
FPrintScan	Haem peroxidase, plant/fungal/bacterial	6e-33
FPrintScan	Haem peroxidase, plant/fungal/bacterial	6e-33
FPrintScan	Haem peroxidase, plant/fungal/bacterial	6e-33

See the detailed result >

AT1G71695.1

Model type: Protein coding
Short Description: Peroxidase superfamily protein
Computational Description: Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cell wall, vacuole, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4523 Blast hits to 4498 proteins in 279 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 207; Plants - 4264; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
Link: InterPro Scan - TAIR