K20202

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20202

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20202

Determination of introduced cDNA(s)

  • J033023G20 - Rice Full-length cDNAs - Original: J033023G20

    full reading [+] show sequence

    Nucleotide sequence: J033023G20 - full reading 
    GATCCCTGTG TCTCTGAACA TGACACATTT AATTCAGAGT TAAGCTCAAG 
    TCTGTCAAGA GGAAAATTAA TAATTGCATT AGCATATTGC CTAGCTATAA 
    TACTAGTAGT TTCAGTTAGA TCCTTGACAA GTACTCCATT TTGGTCTCTA 
    TCCAGTTCAG GCTTCTTTCC CTCCCTTTTT AAGCCCACAT CACCTTCCAT 
    TGCCACCCAA AGAAAACCTC TCTCTCAAGT GTCCTAACAA CTTCTCTCCA 
    TCTCTCTGAA GCCAGCAAAT TAAACTCTCT TTCTGAAAAT TTCAGTACAG 
    AGCTTCTGAA GATTCTGATC ATGGAAGGCT TCATCCCGTT CATCTACAAG 
    GCCATCGTGC AGTACAGGAA AGAAGGGCAG GTCTCCGTCG GTGACCTCTT 
    CTTCGACGAG CCGTCGCCGT CGTCCTATTT CCGCCTCCCC GGCGACTCCG 
    GTCGGTACCA GCAGCAGCAG CAGGCGGCGA TGAGCGTCCT CTTCTCTCAG 
    GCGACGACGG CTGATTCCGA CGCGGTGGCG CCGCGTCGGT CCCCGCTGCG 
    GTGCACGGTG CATCACCGTC GGCCGGCGAC CGCAACACCA TGAATCATAT 
    CATGGTGATG GAAGTGCAAG GTGGCAACTG GCAACAGAAG AAATTAAGCA 
    ACTCAAATGG AAGCAAAGCA AGTGAAGACT TGCTTAGGTG GTAGGAATGG 
    AGGTTGGTAG ATTAATTGTG GTATGCATGC AGATTGAGCA ACTGTGAATA 
    TTATACTAGC ATAAGTTGCA GTATATGTTA CTGTTTTTTT TTCTATTTCT 
    TTTCTTTTTA GATTGTGATT TGTGAAAATG TGCAGAAATG ATGCATGGGT 
    GCAAGTTCTC CCAAGGAGAT CTCTGCACCA TAATTAGAGT GGAAAGTTGA 
    GAGTTGTGTA TAGTGCCATC GAGGAATATG GCAATAAAAA AAGTGTGTAC 
    ATGTACAAAG CACGTATATA TACATGCATG GTTGCC

    Gene models with high sequence identity

    1. AT5G02090.1 [+] show detail - unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazo...
      E-value: 4e-06; Score: 49.30

     

    InterPro Scan Digest

    See the detailed result >

    AT5G02090.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR