K20239

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20239

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20239

Determination of introduced cDNA(s)

  • J023031G07 - Rice Full-length cDNAs - Original: J023031G07

    full reading [+] show sequence

    Nucleotide sequence: J023031G07 - full reading 
    GATATCCGAT CCCTTCTCGA TCATCGCTCA TCATCACAAT CATCAACAGC 
    TCAGTTCATC CGTGCCGTGT TAATTTAGCT AGCTAGCAAT CGAGCTCAGT 
    TTTCCTAATT AATTGCTAGC TCGATTTGCT CGGTGATCTC TTCAATTCGC 
    CGGAGCTTGG AATCAATCGA GAGATTAGAG TGTACGTGAG AGCTAGCGGG 
    AGATCGTCGG CGGCGATGGT GAACACGGCG GCGGTGGCGG CGGCGAAGGG 
    CAGCAGGGGC AGCGGGCTGC CGCTGGCGTC GCTGAACCAC ATCAGCATCG 
    TGTGCAGGTC GTTGCAGGAG TCGCTCACCT TCTACACCGA CGTGCTCGGC 
    TTCTTCCCCG TCCGTCGCCC CGGATCCTTC GACTTCGACG GCGCATGGCT 
    GTTTAATTAT GGGATTGGTA TCCATCTGCT TCAGGCTGAA GATCCTGACA 
    GCCTGCCAGG GAAAACAGAG ATCAATCCTA AAGATAATCA CATCTCCTTC 
    CAGTGTGAGA GCATGGTGGC AGTGGAGCGG CGGCTGAAGG AGCTAGGCAT 
    CCCTTACATA CAACGATGTG TGGAGGAAGG TGGCATCTAT GTGGACCAAA 
    TCTTCTTCCA CGATCCCGAT GGCTTCATGA TCGAGATCTG CAACTGCGAC 
    AACCTCCCCG TCGTCCCCCT CGGCGCCGAC CAGCCGCTCG TCATGGCCGC 
    CTGCAAGAGG GCCGCCGTCA TCAAGCAGCA GCAGCAGGCG TCCTCTTCTC 
    CGGCGACGGC GGCGGCGGCG GCACAGTGCG CCGTGCCATC GTCGACGAAG 
    GCGATCCACG TCGGCGAGGA GGCACACATC TCGTGCGCCT AAAGGCAGGA 
    GAGATTGTGT ACATGCTTGT GTGGCTGCAA TGCAATTAGG GATGCAAGTA 
    GGCTGATGTA CAAACTCACC AAAATAGGTT ATTTACTACT CCCTTCTCTC 
    GTAAAAAAAC CAATCTAGGA TCGGATGTGA CACACCTTCA TACTACGAAT 
    CTAGACATAT ATATGTCCAG ATTCACAGTA CTATAATATG TCATATCTGA 
    TTCTAGGTTT GTTTTTTATA GCAAGGATGG AGTACGTGGT TGGTGGGTTG 
    GTCCACTTAA ATAGCATGTA TGTGGGTTAG TGGTCAGCTC TCTTTCATCG 
    CTAAATGCAA TGAACGGTTG TGGTTTGCTA GATCAGTTGT CAGGTTATGC 
    GATTGGGCTC ACTGGGAGTT TGTACATGAG TACTATGGTG TTGGGCAATG 
    TAATCCCCTT TGTTATAAGT AAAGAATAAA TTAAGCAGAA TGAGTC

    Gene models with high sequence identity

    1. AT1G80160.1 [+] show detail - Lactoylglutathione lyase / glyoxalase I family protein
      E-value: 2e-57; Score: 219.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Glyoxalase/bleomycin resistance protein/dioxygenase 7.6e-11
    superfamily Glyoxalase/Bleomycin resistance protein/Dihyd 4.1e-25
    HMMPanther LACTOYLGLUTATHIONE LYASE (GLYOXALASE I) 1e-34
    Gene3D no description 1.6e-23

    See the detailed result >

    AT1G80160.1

    Model type
    Protein coding
    Short Description
    Lactoylglutathione lyase / glyoxalase I family protein
    Computational Description
    Lactoylglutathione lyase / glyoxalase I family protein; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR