K20316

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20316

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20316

Determination of introduced cDNA(s)

  • J023122H24 - Rice Full-length cDNAs - Original: J023122H24

    full reading [+] show sequence

    Nucleotide sequence: J023122H24 - full reading 
    GGGGAAACAC TGCACTCGAC GCTGCTTTGA ACGCTCAATT TTTGGTCCAG 
    ATTGGTATTT TTACTGCAGT ACCGATGATA ATGGGTTTCA TTTTGGAACT 
    GGGGCTACTG AAGGCTATTT TCAGTTTTAT TACAATGCAA CTGCAGTTCT 
    GCTCAGTGTT TTTCACATTC TCTCTTGGAA CTAGAACACA TTATTTTGGG 
    AGAACAATAC TTCATGGTGG TGCAAAGTAT CATGCTACTG GTAGAGGTTT 
    TGTTGTTCGT CACATAAAAT TTGCCGAAAA TTATCGGCTC TATTCTCGAA 
    CCCACTTTGT GAAAGCGCTT GAAGTTGCTC TCCTCCTCAT TATCTACATT 
    GCATATGGTT ATACAAGGGG CGGTTCATCT TCCTTTATTC TATTAACTAT 
    CAGTAGTTGG TTCCTCGTCG TGTCCTGGCT CTTCGCACCA TACATTTTCA 
    ACCCTTCTGG TTTCGAGTGG CAAAAGACTG TTGAGGACTT TGATGACTGG 
    ACAAATTGGT TACTTTATAA AGGTGGAGTT GGTGTAAAGG GGGAAAACAG 
    CTGGGAATCT TGGTGGGATG AGGAGCAAGC CCACATCCAG ACATTAAGAG 
    GACGTATCCT AGAGACTATC CTAAGCCTCA GATTTCTTAT TTTCCAATAT 
    GGCATTGTTT ATAAGCTCAA AATTGCTTCA CACAATACAT CTCTTGCGGT 
    TTATGGCTTC TCATGGATTG TACTTCTCGT TTTGGTGCTC CTATTTAAGC 
    TTTTTACTGC AACTCCGAAG AAGTCAACCG CCTTGCCAAC TTTTGTTCGG 
    TTTCTACAGG GCCTCCTTGC GATTGGAATG ATTGCAGGAA TTGCTCTACT 
    TATTGCATTG ACAAAGTTTA CAATTGCTGA TCTATTTGCA AGTGCGCTTG 
    CTTTTGTAGC AACTGGATGG TGTGTTCTAT GTCTGGCTGT CACATGGAAG 
    CGCCTCGTGA AATTCGTTGG GCTCTGGGAC TCAGTCCGTG AGATTGCTCG 
    GATGTATGAT GCCGGAATGG GTGCTCTCAT CTTTGTGCCC ATTGTGTTCT 
    TTTCATGGTT CCCCTTCGTA TCCACCTTCC AGTCACGTTT CCTGTTTAAT 
    CAAGCTTTCA GCCGTGGTCT GGAGATCTCC CTCATCTTGG CAGGAAACAA 
    GGCAAATCAG GAGGCATGAA AAGCCTAACC ACCTAACCGC CTGGATATTT 
    TTGTTGTATA TTCTTGGAAT TGATTAGTGG TACTTGATTT GAACAACACC 
    TTTGTACATA ACTGCCTGCC ATTTTAGGAG CAAATTATGT ATCCAAACTA 
    ACAGTGCCAT GCCAGTTTAG ATGTGAGTAT TCATCTCTTG TTTGTAGCCG 
    TAACGACCTG TAATTTGAAC ATTCCGGTAA TTTGGATGCG ACAATTCAG

    Gene models with high sequence identity

    1. AT2G36850.1 [+] show detail - glucan synthase-like 8
      E-value: 6e-171; Score: 597.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G36850.1

    Model type
    Protein coding
    Short Description
    glucan synthase-like 8
    Curator Summary
    Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).
    Computational Description
    glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR