K20407

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20407

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20407

Determination of introduced cDNA(s)

J033094B17 - Rice Full-length cDNAs - Original: J033094B17

full reading [+] show sequence

GGTCGTCCAC GGTGCGCCGC CACCCCAAGC AAAGCAGTGG CGGTGGCGGC 
GGCGCGGTGC CGAGCGCGGC CGGCGCCTCG GCGGGTGGGG GCGGGCGCCG 
CTACCGGCGG TACGGCGCAC GTCGGCGGGC GAGAAAGCGC CGCTGGAGTG 
CTGCTACTTA CTTGGCTGCG GCATGGCGGC GGGACCTTCG CTCCGTCGCG 
GCGGCCGGCG GTTAGCCGCT CGGCTAATCC AAATCCGGCC GGGCAAAGCG 
AGCACATTCT CCACTGCCTT AGGAGCAAAT TTCTTCACTG CGTCCCCGAC 
AGTCAGGAAT ATCTTGTCTT CACCGATGAG ATCCGTGAAT TTCGCTGATC 
GGAGCTTCAG GATCACAGCT GGCCCCGGAT TGGCTAGAAT CAGCTGAGGA 
ATGCCAGGAA GGATGCTCCG ATCAATATCG TCTGCCAGTT CCACTGCAGC 
AGCAACCAAG CTAGCATCAG TTGTACCCAA TACTGGTTTC CATCAAAGAA 
TGATGAAGAA GCAATAAGTT CTTAAAGGAA TGATATTATT TTGTCCTACC 
CCATGGTGAA CATTTCCCCA GACTGATTTC ATGACCGAGA TGATGTCAGT 
CTTCTTGGTG AAGTTTGCAA TTCCAAGGAA GCCTTTAAGC TGCTGAAGGG 
CAATGGTGAT GGCCGCTCCC GCCATGAATC CAACGATGGC AGCATGGGAC 
AAGAACTCTA TGATAAACCC TAGCCTGCAG CAGAGTACAA TCTCACTCTA 
TGGTAGCCAC TCACCTGAGG AATCCGAGCG CTGCCTGGGT GACCCCAGCG 
AAGAACGTTG CAGTGAAGGC CAGCCGGGTG TACTCTTCCT GATTCTTCTT 
GGGATCAAAC TCATTCTGGA GGAGAGTGCC AAGCAGCAGC GAAACGACGG 
CCACTGGACC AATGGCTATA TCCCTGGAAC TTCCCATCAT CGCGTATATC 
AAAGGCGGTA CGAAGCTGCT GTCTGAAAAA TCAGCAGATT TCCGTTAGAC 
CACTGGCTGG ACTATCACTC GAGCACACCC TATACAAATA CTAGAGCTGT 
GCTATTCAGG TCGCTGCTGT GCGTGCAAGA TGGTGTTTGA TCGTCAGGCA 
CAAACCTGGG GTATGCAGAG GCTGGCAATG GTGAGGGAGA CGAGGTCGCC 
CCTGAACTTG CGGAAGGTGT AGTGCCGGCC CCAGTCCAGC ACCGGGAAGA 
AGTTTTGCAG GCTGATCAAC ACCTTCTTTG ACATCGGCTG GTCCTTGTAC 
TGCCGCAACG GGTCGTCGGC GAAGAACGTC TCCTTCACGG CGTCGGTGAA 
CTCGTCGATG AGCTTCTTCT TCGGTGGGAA CTCGACCTTG TGGCCGTGAT 
GATGATGATG ATGGCCGCCG TCCATGTGGC TGTGCGATGA CGTCCGGCTG 
GCGATGTCGG CGTCGATGGC CTCGCCCCCG TCGGACACGG CTCGCGGCAT 
TGCCGGCGTT ATTCACCGGC AAGGTGCTGA AGGCGAACCT ATCTGCACAT 
GAAGCGCAGT ACTGAAGCAG TACTGCCAAA GCACCTGCAT GCATCAACGC 
ATGCATGGTC GACAGTGAAG AAAAAAAAAA CTTTTGCAGT ACGGAGAACC 
AAAATATCTG AAACATTTGC ATTTACAACG CAGGGAAGAA ATCTATATGT 
ATGTACTAGT ACTACTAACA AGAAGCAGC

Gene models with high sequence identity

AT1G78000.2 [+] show detail - sulfate transporter 1;2
E-value: 3e-73; Score: 98.60

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Sulphate transporter	2.4e-22
HMMPfam	Sulphate transporter/antisigma-factor antagonist STAS	5.3e-05
HMMPanther	SULFATE TRANSPORTER	3.5e-05
HMMPanther	SULFATE TRANSPORTER	3.5e-05
HMMPanther	SULFATE TRANSPORTER	1.5e-28
HMMPanther	SULFATE TRANSPORTER	1.5e-28
HMMPanther	SULFATE TRANSPORTER	1.6e-21
HMMPanther	SULFATE TRANSPORTER	1.6e-21
HMMPanther	SULFATE TRANSPORTER	2.6e-21
HMMPanther	SULFATE TRANSPORTER	2.6e-21

See the detailed result >

AT1G78000.2

Model type: Protein coding
Short Description: sulfate transporter 1;2
Curator Summary: Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.
Computational Description: sulfate transporter 1;2 (SULTR1;2); CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 1;3 (TAIR:AT1G22150.1); Has 10127 Blast hits to 10032 proteins in 1879 species: Archae - 35; Bacteria - 6193; Metazoa - 1167; Fungi - 451; Plants - 560; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink).
Link: InterPro Scan - TAIR