K20505

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20505

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20505

Determination of introduced cDNA(s)

  • J013001B23 - Rice Full-length cDNAs - Original: J013001B23

    full reading [+] show sequence

    Nucleotide sequence: J013001B23 - full reading 
    GATCTTCTCT ATCTACACTT GTACACAACA CTAGCAAACC GCCATGGCGC 
    CGCCGCCGCC GTGTTGTGTG CTAGTGGTAC GCTGCTGTTC CGGATCCCTC 
    CCTTCGCCGC CGCCGCCGCC GCCGCCCAGA CCCTCTCCCT CCAACAACCT 
    CAGAATCGCC AGAAGAGAGT TTGTGCTGAG GAGCAGTGAG CTCGCCACGC 
    TCGCTGCCAT CTTCCACTTG AGCGGCACGA AGCCAAGGTA CCTGGGCGTG 
    CAGAAGAGTC CTCCATCGCT GGCTCTGTGC CCTGCCACCA ACAATTGCGT 
    TTCCACTTGT GAGGACATCA CTGACTCCAT TCACTACGCT CCCCCATGGA 
    ACTATAACCC CAAGGACGGA CGCAGGGCTA AACCCATCAC CAAACATGAA 
    GCCATCAACC AGCTCATTCA AGTCGTCACA CAAACAAAGC CTGACAACTT 
    CACTCCTCGC CTAGTAGAGA AAACAGATGA CTATGTTCGA GTTGAATACG 
    AGAGTCCTAT ATTCGGGTTT GTAGATGATG TGGAGTTCTG GTTCCCTCCT 
    GGTAACAAAT CCATTGTTCA GTACCGATCA GCATCTCGAT CAGGATTCAT 
    TGACTTCAAC GCCAACAAGA AAAGAGTCAA GGCGCTCAGG TTGGCACTGG 
    AAAACAAAGG CTGGGCTTCA GAAAGCACCA TCTGAACCTA ACCTCAAGGA 
    AGCCAACCCC TCGAGTCTGT ACTGGAGTGT GGATTCTAAT CCCTCGAGGG 
    ATATCCCCTC GTATATCTTT TTCTTCCAAA TTCGATGCAA ATAGTTGTGA 
    AAAATTCTAA AAAAAATTGA TAATGTAGAG TATAATGATA CCTACTAGTC 
    CACCAAAATT CATGTTCAAA TTCGATCTAC ACATCGAGAA ACAAAAAAGA 
    CAAATTTAGA TATAAACAGT ACGCTATTAT TCATACGCTG AATTTGTCTT 
    TTTTATATCT CGACTTGTGA GTTGAGTTTG AACTTAAGAT TTTGTGGAGT 
    TGTATATATG TGTTGTATGA ATGTTGTCAA ATTTTTCCAG AATTTTTCAT 
    AACCGTTTAG ATGGTTTTTG ACC

    Gene models with high sequence identity

    1. AT3G60810.1 [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010...
      E-value: 2e-59; Score: 226.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPIR Protein of unknown function DUF1499 7.2e-94
    HMMPfam DUF1499 5.5e-32

    See the detailed result >

    AT3G60810.1

    Model type
    Protein coding
    Computational Description
    unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 444 Blast hits to 444 proteins in 143 species: Archae - 0; Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR