K20848

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20848

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20848

Determination of introduced cDNA(s)

  • J013134N08 - Rice Full-length cDNAs - Original: J013134N08

    full reading [+] show sequence

    Nucleotide sequence: J013134N08 - full reading 
    GAGATTCGCC TCTCCCTCCC GAGGCCTTGG CCGGCGCGAG GTCGAGGAGA 
    GGAAGCTCCC ATGGCGGAGG AGGCGGCGCA GGAGCAGCAG ACGGACCCCG 
    CCGCCTCCCG CCCCGTCCGC TGCATCGTCA AACTCGGTAC TCGCGCGCGC 
    TCCGTCGCTC CCTTGTTTCC TCTCTGCTCC TCTTTAGCAG CTTCGATGGC 
    GCAGGTGGAG CGGCCATCAC GAACAAGGGA GAGCTGGAGA GCATCGACGC 
    GGCGAGCTTG CGGTCGGCGT GCGCGCAGCT GCGGCAGGCC ATGTCCCACG 
    GCGGCGCGGC GGGGAAGGTT GTGGGGATGG ACTGGAGCAG ACGGCCCGGC 
    GATCCGACCG GCCCGGTCGT GGATGTGGAG GGCTTGTCGG AGATGGGAGG 
    CTTGGGGCTC GACTCCAACT TCGTCGTCGT CCATGGTGCC GGTATGCATG 
    GCTCCTCATC TGAACTAACA ACTGTGCCTA TCTGTCATTT TGTATTGCTG 
    ATGAGTTCAT GAGCAGAACT GGGGGATCGG TGGTCGGTTG GGATCTGGAG 
    ACGATAGGAT CAGCTTGATT GCTGTATTTT GGTTTCAGAA TACTACTACG 
    GCTAAGTGAA AATTTGGTGC GAAACTGTGA ACCAAGTACC ATTCTCAATG 
    TGTATCAATG ACAAGCAATT GTAAACATTG TTCACGACCT GCTTAACCGG 
    TCTATATTCG GAACGTAGCT GACCTTCGTG GAATATATTT GAATAAATCT 
    GTTTTGATTG GTAGACACCC TGAAAATATA GTTTTAGATC ATAGACCATC 
    GGGCCCGGCT TTTATAGAAA GCCAGAAGCG GCACAGTGGT GGGGGAGACC 
    CACTTACAAG AGTTCAGCAC AAAAACACAG AAACAGGGCA GAAACCAAAC 
    CATGCCAAGG GATACAAAGG GGTTGAAGCT AAGCGACCAA AAGCAAAAGA 
    CAACTCAGGC ACCTCTAAAC AACTCAACAG ATAACAGCTA ACCAACAGCA 
    CCACAGAAAA AGCATCAGTG CTTACCCTAC TCCAGCTCTG GGAGGACCAA 
    GGGAGGAGAC TGCTTCCATA AGTTTGCTAG CCATGGCCTC CAGCTTCTCA 
    GCATCCTTCC TGCTTAGGAC TTTCCACTGC ATCAATAAAG ATTTGATTTG 
    AAAATGTAGT CCTAGGCAAC CAGGGGAGAA TAAAGAAAAT AGCTCACACT 
    TCATGATGCC TGTAATACTG GCCGACTATA ATTGGCCTGT TGTAGTTTAA 
    AGGATACAGC CCACGATTTT GGTGGTGTAA TAGCTGACTA CCTACATCTG 
    CTACCTCAGG GTCTTTTGGT CACTTCCAAG CAAGTAGATC TGGAGTCCAT 
    AAAGGGGGTC TTCATTCAAC ACTTGTGAAG GCTGGCTTTG TGGCTACAAG 
    AATTTCAGTC ACTTCTCTCA ACCAGGAGAT TGTTAGAGCT CTTGCAAGAG 
    AAGGAATACC GTCTGTTGGG ATGTCACCGT TTGCTTGTGG ATGGTCTACT 
    AAGCAAAGAA ATGTGAGAAA GCAAACAATT AACTAAATTT CTTCTGTTTC 
    TTTGGACATG GACTTGACAT TGCAAAGTTC TTGAAGATCT ATGTCTAATC 
    CTATCAACAG AGATGCCCTT TGATTTTTTA CCTTCCAGTT TTGCACTTAC 
    AGCTTGAATC AGTGGATGCT TCTCAAATCA TGCTATCACT CCATGTTGGC 
    TTTGTCCCTG TTTTGCATGG AGATGCTGTT CTTGATGAAT TGCTGGACTG 
    CACCATTTTG AGTGGGGATG TCATTATACG CCATCTTGCA CAGCTTCTGA 
    GTCCAAAATA TGTTGTATTT CTGACAGATG TCCATGGAGT ATTTGATCGT 
    CCTCCATCAG ACCCGAATGC AGTACTTCTC AGAGAGATAG CGGTGGATGA 
    AAATGGCAGC TGGTCGATTG TAAAACCAGC ATTGAAAGGC AACAAGAAAG 
    GAGTGGAGAT ATCTGTAGCT GCACATGACA CCACTGGCGG AATGGAGACC 
    AAAATATTGG AAGCTGCTGC GATAGCTAGG CTTGGAGTTG ATGTGTATAT 
    TACAAAGGTT GGTACAGAAC ATTCACTGAG AGCCTTAAAA GGGGACACGA 
    GCTCAGAAGA TTGGCTTGGA ACCGTCATAC GATCTTCCAG ATAGAATTCT 
    TGGCCTATCA TTTTCGGGAG TAAGCATCCA TTGGCAAATA TTTTATCACC 
    ATTATTGTAG GACGATTGTG AAGCTATGAG CTGATCACCT GTCAAATGAT 
    TCATGGGGTT ATTATTGCTG AATCTCATAG CAGACAATGA GGCAGAGCTC 
    GGTGTTATGC TACAAGTAAC AGTCCTACGA CATTATAATA AGTAACCTTA 
    TTTTGTTTGC T

    Gene models with high sequence identity

    1. AT1G26640.1 [+] show detail - Amino acid kinase family protein
      E-value: 3e-54; Score: 210.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Aspartate/glutamate/uridylate kinase 4e-15
    HMMPfam Aspartate/glutamate/uridylate kinase 1.2e-14
    HMMPfam Aspartate/glutamate/uridylate kinase 3.4e-38

    See the detailed result >

    AT1G26640.1

    Model type
    Protein coding
    Short Description
    Amino acid kinase family protein
    Computational Description
    Amino acid kinase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048); Has 592 Blast hits to 592 proteins in 236 species: Archae - 208; Bacteria - 227; Metazoa - 7; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR