K20849

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20849

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20849

Determination of introduced cDNA(s)

  • J023101J24 - Rice Full-length cDNAs - Original: J023101J24

    full reading [+] show sequence

    Nucleotide sequence: J023101J24 - full reading 
    GAGCTTCTCT CTCTTGCTGG CTGGCTCTCT GCGCGTGGTG TGTACTCCTG 
    CTGTCCCTGC TGCGGCTACA GCTACTGTTG CAGCTCGGGC ACCCAGAAGG 
    CCAGAAACCC AGAACAAGTC TCACACCCTC CTCCTCCTCT CGTCCATACT 
    AGCACCACCG CTGCTGCTGT TGCTCCTGCT GCTGTGCTGC CGCCGCCTGC 
    TCGTCCAAGA ATCTTCCAGC TTTCCCCAAT ACTGAGCAGC CAACTCCTGC 
    TACCGCTTCT TGATCTGTGG GATTTTCTTC TTGTTTCGAA TCCAAGATCA 
    CTTCCAATCC ATAGTTTTGG CTTTTGGCTT CCCTCCAGCA TCAGTGAAAA 
    TTGGTTCTTT GGAGGGGAAG AAATGGATAG CGGCTGGATA TGCTTCTTGA 
    GCCAGATTGC TGATTTGATG CAATAAGATT TCTATCTTAT TTCTTGCTGC 
    AGTATCACAA ATCAAACTAG GAGAACTGAC TGAGAAGTGA AATATTCTGC 
    TTCCAAGAAT CAATCAGATA AACTGATTCC AAGAAAATAA CAAGAAGTAA 
    TCAGATAACA GAAGCAGCTG CAGCTGCAGC AGTAGCATCT TTCTGTTCCC 
    AGTAATTGCC CAATCCAACT CCAGCTAGAT TTAATCAGAT AGAGAAGTAA 
    TCTGCTGGAT TGAAATCCAT GGGTAGGGGA AGAGGCAGAG GGAGGAAGCT 
    CACCAATGGC AGGAGCCATG AGGACAAGGG CAGCAGCGGC GAGGAGGTTG 
    TGCCTGCGAG GAAGAGGAGG GGAAGGCCGC AGAAGCGCAT TGTCGACAAG 
    GTGGTGGATC AAGCAGAGGC CAAGAATCTA ACCGAGGGCG ACGACGGTGA 
    TGCTGACTAC CAACAAGGCG AAGGAGAAGA CGGCGGTGCG AAGCCGAAGG 
    TGTCAAGAAC GGAGAAGAGC TCTGCAGGGA AGGGCAACAA GAGGAACAGG 
    CTGCCCAAGG AGGAAGAAAG CTCAAACCTT GACCTTGAGG AGAACAGCTC 
    AAGCACCCGG TCCAGCAACG ATGAATCCAC CAGGTCCAAT GGCTTCCGGC 
    AGAATGGCAG CCGGCGTAAG AGCACGCCGC GGCGAGCCGC GGAGGCGGGG 
    ATATAGCTTG GAAACTTTGG AATAGGGTGG GGAGGACAGT TTCATCAGGG 
    ATTGGTTCTT GGGTTATATC ATCAGTTAGG CAAGCTGCTC TTCAGTTTTG 
    TCATCTTCAG ATTCGGCAAG TTTTCCTTCA AAATTTTGTC ATGTTCATGT 
    TTGCTAGGCA CCAACATGAA TGTAATGTAA ACATATACTA ATCCGCGAGA 
    CATCGGAGTT TTGCTTCTGG TGATGAAAAT TGTATGAACT AGCATCGGCT 
    TATGGTACT

    Gene models with high sequence identity

    1. AT2G42190.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57930.2); ...
      E-value: 0.00000000006; Score: 65.90

     

    InterPro Scan Digest

    See the detailed result >

    AT2G42190.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57930.2); Has 1381 Blast hits to 1230 proteins in 175 species: Archae - 3; Bacteria - 25; Metazoa - 672; Fungi - 135; Plants - 127; Viruses - 30; Other Eukaryotes - 389 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR